Information for 16-TGCTGAAGAG (Motif 20)

A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G
Reverse Opposite:
G T A C A G C T A G T C A C G T G A C T A G T C G C T A A C T G T G A C G T C A
p-value:1e-8
log p-value:-1.894e+01
Information Content per bp:1.827
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif5.07%
Number of Background Sequences with motif613.6
Percentage of Background Sequences with motif1.28%
Average Position of motif in Targets97.0 +/- 55.2bp
Average Position of motif in Background97.3 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----TGCTGAAGAG
AATTTGCTGAC---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:2
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----TGCTGAAGAG
AAAATGCTGACT--
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----TGCTGAAGAG
AAAWWTGCTGACWWD
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G

PB0041.1_Mafb_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TGCTGAAGAG--
AAATTTGCTGACTTAGA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G A C G T A C G T
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C

POL008.1_DCE_S_I/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGCTGAAGAG
---NGAAGC-
 A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TGCTGAAGAG--
--CTYRAGTGSY
 A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G A C G T A C G T
A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:7
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TGCTGAAGAG--
--BTBRAGTGSN
 A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G A C G T A C G T
A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:TGCTGAAGAG
TGCTGACTCA
 A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

Gabpa/MA0062.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGCTGAAGAG--
-CCGGAAGTGGC
 A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G A C G T A C G T
A C G T T A G C T G A C A C T G A C T G T C G A G C T A T C A G G A C T T C A G T C A G T G A C

ETV6/MA0645.1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGCTGAAGAG
AGCGGAAGTG
 A C G T A C T G A G T C C G A T C T A G C T G A T G C A A C T G C T G A C A T G
T G C A A T C G T G A C C A T G C A T G C T G A C G T A T C A G A G C T C T A G