Information for 6-TTGTCCSR (Motif 22)

G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G
Reverse Opposite:
G A T C A T C G A T C G T C A G G T C A G A T C T G C A C G T A
p-value:1e-8
log p-value:-1.868e+01
Information Content per bp:1.497
Number of Target Sequences with motif56.0
Percentage of Target Sequences with motif10.92%
Number of Background Sequences with motif2250.7
Percentage of Background Sequences with motif4.71%
Average Position of motif in Targets97.5 +/- 52.0bp
Average Position of motif in Background100.0 +/- 63.7bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCSR
YCTTTGTTCC-
 A C G T A C G T A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:TTGTCCSR--
CTGTTCCTGG
 G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G A C G T A C G T
T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

PB0173.1_Sox21_2/Jaspar

Match Rank:3
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------TTGTCCSR---
AATCAATTGTTCCGCTA
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G A C G T A C G T A C G T
T G A C T C A G A G C T A T G C G C T A C G T A A G C T C G A T A T C G C G A T A G C T A T G C T G A C A C T G G A T C C A G T T C G A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCSR
CCWTTGTYYB-
 A C G T A C G T A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G
A T G C A G T C G C A T A G C T A C G T T C A G C G A T A G C T G A T C A T C G A C G T

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGTCCSR-
NRYTTCCGGH
 A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G A C G T
A G T C C T G A A G T C C G A T C A G T G A T C A T G C A C T G A T C G G A C T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TTGTCCSR
TTTTCCA-
 G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G
C G A T A C G T G A C T A C G T G T A C A G T C G C T A A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------TTGTCCSR--
GAGCCCTTGTCCCTAA
 A C G T A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TTGTCCSR
CCATTGTTNY-
 A C G T A C G T A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:9
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTGTCCSR
CTCATTGTC---
 A C G T A C G T A C G T A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G
G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTGTCCSR
NCCATTGTTC--
 A C G T A C G T A C G T A C G T G C A T A C G T C T A G A C G T A G T C A T G C T A G C C T A G
A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T A C G T