Information for 12-GTTTCACA (Motif 30)

A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A
Reverse Opposite:
A C G T A C T G A C G T A C T G C G T A C G T A C G T A A G T C
p-value:1e-4
log p-value:-9.907e+00
Information Content per bp:1.530
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.53%
Number of Background Sequences with motif315.4
Percentage of Background Sequences with motif0.66%
Average Position of motif in Targets109.8 +/- 65.7bp
Average Position of motif in Background95.2 +/- 66.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACA
TGGTTTCAGT
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A
G A C T C T A G T A C G C G A T G C A T A C G T T A G C T C G A A T C G C G A T

Tbx21(T-box)/GM12878-TBX21-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.76
Offset:1
Orientation:reverse strand
Alignment:GTTTCACA---
-TTTCACACCT
 A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T A C G T G C A T G A C T T A G C C G T A G A T C C G T A T G A C G A T C G A C T

PB0013.1_Eomes_1/Jaspar

Match Rank:3
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCACA-------
NNTTTTCACACCTTNNN
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T G A C T G A C G A T C A G T C A G T A G C T T G A C C T G A A G T C C T G A T A G C G A T C G A C T G A C T C G A T A G C T T G A C

TBR1/MA0802.1/Jaspar

Match Rank:4
Score:0.75
Offset:1
Orientation:reverse strand
Alignment:GTTTCACA---
-TTTCACACCT
 A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T
A C G T C G A T C G A T G A C T T G A C C T G A T A G C T C G A T A G C G A T C G A C T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:5
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--GTTTCACA
CGGTTTCAAA
 A C G T A C G T A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

EOMES/MA0800.1/Jaspar

Match Rank:6
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCACA----
NTTTTCACACCTT
 A C G T A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
C T G A G C A T C A G T C G A T A G C T T G A C C T G A A G T C T C G A T G A C G A T C G A C T G A C T

TBX2/MA0688.1/Jaspar

Match Rank:7
Score:0.71
Offset:1
Orientation:reverse strand
Alignment:GTTTCACA----
-TTTCACACCTN
 A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C A T G C A T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T G C A T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.71
Offset:0
Orientation:forward strand
Alignment:GTTTCACA--
HTTTCCCASG
 A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

TBX20/MA0689.1/Jaspar

Match Rank:9
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTTTCACA----
-CTTCACACCTA
 A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A

TBX21/MA0690.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:GTTTCACA----
--TTCACACCTT
 A C T G A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T C G A T A G C T T G A C C T G A G T A C T C G A T G A C G A T C G A C T G A C T