Information for 7-ACACAGTTGCAA (Motif 6)

C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A
Reverse Opposite:
A C G T C G A T A C T G A T G C C G T A C G T A G T A C A C G T C T A G A C G T A C T G A C G T
p-value:1e-12
log p-value:-2.860e+01
Information Content per bp:1.900
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.56%
Number of Background Sequences with motif10.2
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets129.0 +/- 59.6bp
Average Position of motif in Background114.8 +/- 60.0bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MYB/MA0100.3/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ACACAGTTGCAA
-NNCAGTTGNN-
 C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A
A C G T C A T G C T G A A G T C T G C A A C T G C G A T G A C T T C A G T C A G C A G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ACACAGTTGCAA
GHWACAWTGTWDCWA
 A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A
C T A G G C T A G C A T G C T A G A T C G C T A G C T A C G A T C T A G G C A T C G T A C G A T G A T C G C T A C G T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---ACACAGTTGCAA
GHTACAWTGTADCHR
 A C G T A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A
C T A G G T C A G C A T C G T A A T G C G C T A C G T A C G A T T C A G G C A T C G T A C G A T G T A C G C T A C T G A

PB0050.1_Osr1_1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTTGCAA--
ATTTACAGTAGCAAAA
 A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A A C G T A C G T
G C A T G C A T C G A T G C A T G T C A G A T C C T G A A C T G C G A T C T G A C T A G A G T C G C T A T G C A G C T A C T G A

PB0051.1_Osr2_1/Jaspar

Match Rank:5
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTTGCAA--
ATGTACAGTAGCAAAG
 A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A A C G T A C G T
G C A T C G A T T C A G G C A T G T C A G A T C C T G A A C T G C G A T C T G A A C T G A G T C G C T A G T C A G C T A C T A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:ACACAGTTGCAA---
---CTGTTGCTAGGS
 C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

PB0055.1_Rfx4_1/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACACAGTTGCAA-----
--NNCGTTGCTATGGNN
 C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0089.1_Tcfe2a_1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACACAGTTGCAA---
ATCCACAGGTGCGAAAA
 A C G T A C G T C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T
T C G A A C G T G T A C G T A C T G C A G T A C G T C A A T C G T A C G A G C T A C T G A G T C C T A G T C G A C G T A G T C A C G T A

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:ACACAGTTGCAA
NNACAGCTGC--
 C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:ACACAGTTGCAA-----
--NCCGTTGCTANGNGN
 C G T A A G T C C G T A A G T C C G T A A C T G A C G T A C G T A T C G A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G