Information for 5-TGTAATATCC (Motif 9)

G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C
Reverse Opposite:
A C T G T C A G C T G A C G A T C G T A C G A T A G C T C G T A A T G C C G T A
p-value:1e-11
log p-value:-2.737e+01
Information Content per bp:1.702
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif7.21%
Number of Background Sequences with motif844.0
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets100.7 +/- 52.1bp
Average Position of motif in Background98.7 +/- 64.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGTAATATCC----
ANANNTGATACCCNATN
 A C G T A C G T A C G T G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T A C G T
C T G A C G A T C G T A G C A T C T G A G A C T C T A G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A C T

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TGTAATATCC--
-AAGATATCCTT
 G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T
A C G T G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T

PB0012.1_Elf3_1/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:TGTAATATCC-----
--TTACTTCCTNGTN
 G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C T G A A G T C C G A T A C G T G A T C A G T C A C G T A C G T C A T G G C A T G C A T

PH0162.1_Six2/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTAATATCC----
ANANGTGATACCCCATT
 A C G T A C G T A C G T G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T A C G T
G T C A C T G A C G T A G T A C C T A G A G C T C A T G C G T A A G C T G T C A A G T C T G A C A G T C A G T C G T C A C G A T G A C T

Six3/MA0631.1/Jaspar

Match Rank:5
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTAATATCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0163.1_Six3/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---TGTAATATCC----
ANANGTGATACCCTATN
 A C G T A C G T A C G T G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T A C G T
T G C A C G A T G C A T C G T A C T A G A C G T C A T G C G T A A G C T G T C A A G T C G T A C A G T C A G C T G C T A C G A T G A T C

PH0161.1_Six1/Jaspar

Match Rank:7
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---TGTAATATCC----
ANNNATGATACCCCATC
 A C G T A C G T A C G T G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T A C G T
G T C A T G C A C G T A G T C A C T G A G A C T C A T G C G T A A G C T G T C A A G T C A T G C A G T C A G T C G C T A C G A T G A T C

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:TGTAATATCC
GGGAATTTCC
 G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C
A C T G C T A G A C T G C T G A T C G A C G A T A G C T C G A T G T A C G T A C

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TGTAATATCC---
---ATTTTCCATT
 G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T C G A T G A C T G A C T T G A C G A T C C T G A G A C T G C A T

PH0165.1_Six6_1/Jaspar

Match Rank:10
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---TGTAATATCC----
ANANNTGATACCCTATN
 A C G T A C G T A C G T G C A T T A C G G C A T C T G A C G T A C G A T C G T A A G C T A G T C G T A C A C G T A C G T A C G T A C G T
T G C A C G A T C G T A G C T A C A G T G C A T C A T G C G T A A G C T G T C A A G T C T A G C A G T C A G C T G C T A C G A T G A C T