| Rank | Motif | Name | P-value | log P-pvalue | q-value (Benjamini) | # Target Sequences with Motif | % of Targets Sequences with Motif | # Background Sequences with Motif | % of Background Sequences with Motif | Motif File |
SVG |
| 1 |
| CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer | 1e-39 | -9.009e+01 | 0.0000 | 64.0 | 12.48% | 660.0 | 1.38% | motif file (matrix) |
svg |
| 2 |
| BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer | 1e-34 | -7.864e+01 | 0.0000 | 71.0 | 13.84% | 1030.4 | 2.16% | motif file (matrix) |
svg |
| 3 |
| Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer | 1e-29 | -6.906e+01 | 0.0000 | 162.0 | 31.58% | 5849.5 | 12.24% | motif file (matrix) |
svg |
| 4 |
| Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer | 1e-28 | -6.516e+01 | 0.0000 | 162.0 | 31.58% | 6055.9 | 12.68% | motif file (matrix) |
svg |
| 5 |
| Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer | 1e-26 | -6.128e+01 | 0.0000 | 183.0 | 35.67% | 7662.6 | 16.04% | motif file (matrix) |
svg |
| 6 |
| MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer | 1e-24 | -5.756e+01 | 0.0000 | 163.0 | 31.77% | 6556.8 | 13.72% | motif file (matrix) |
svg |
| 7 |
| Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer | 1e-24 | -5.722e+01 | 0.0000 | 127.0 | 24.76% | 4336.6 | 9.08% | motif file (matrix) |
svg |
| 8 |
| BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer | 1e-23 | -5.515e+01 | 0.0000 | 187.0 | 36.45% | 8349.6 | 17.48% | motif file (matrix) |
svg |
| 9 |
| Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer | 1e-22 | -5.158e+01 | 0.0000 | 157.0 | 30.60% | 6534.7 | 13.68% | motif file (matrix) |
svg |
| 10 |
| MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer | 1e-21 | -4.898e+01 | 0.0000 | 130.0 | 25.34% | 4953.1 | 10.37% | motif file (matrix) |
svg |
| 11 |
| Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer | 1e-20 | -4.697e+01 | 0.0000 | 209.0 | 40.74% | 10603.8 | 22.20% | motif file (matrix) |
svg |
| 12 |
| Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer | 1e-18 | -4.172e+01 | 0.0000 | 187.0 | 36.45% | 9398.5 | 19.67% | motif file (matrix) |
svg |
| 13 |
| TCF4(bHLH)/SHSY5Y-TCF4-ChIP-Seq(GSE96915)/Homer | 1e-18 | -4.169e+01 | 0.0000 | 182.0 | 35.48% | 9029.7 | 18.90% | motif file (matrix) |
svg |
| 14 |
| ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer | 1e-16 | -3.893e+01 | 0.0000 | 87.0 | 16.96% | 2932.6 | 6.14% | motif file (matrix) |
svg |
| 15 |
| NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer | 1e-16 | -3.860e+01 | 0.0000 | 177.0 | 34.50% | 8927.2 | 18.69% | motif file (matrix) |
svg |
| 16 |
| Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer | 1e-15 | -3.467e+01 | 0.0000 | 143.0 | 27.88% | 6803.6 | 14.24% | motif file (matrix) |
svg |
| 17 |
| NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer | 1e-13 | -3.220e+01 | 0.0000 | 108.0 | 21.05% | 4614.4 | 9.66% | motif file (matrix) |
svg |
| 18 |
| E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer | 1e-12 | -2.923e+01 | 0.0000 | 164.0 | 31.97% | 8845.3 | 18.51% | motif file (matrix) |
svg |
| 19 |
| HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer | 1e-11 | -2.549e+01 | 0.0000 | 190.0 | 37.04% | 11304.9 | 23.66% | motif file (matrix) |
svg |
| 20 |
| Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer | 1e-10 | -2.502e+01 | 0.0000 | 182.0 | 35.48% | 10721.5 | 22.44% | motif file (matrix) |
svg |
| 21 |
| Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer | 1e-10 | -2.495e+01 | 0.0000 | 242.0 | 47.17% | 15719.4 | 32.90% | motif file (matrix) |
svg |
| 22 |
| JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer | 1e-10 | -2.457e+01 | 0.0000 | 59.0 | 11.50% | 2078.5 | 4.35% | motif file (matrix) |
svg |
| 23 |
| Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-9 | -2.089e+01 | 0.0000 | 33.0 | 6.43% | 870.6 | 1.82% | motif file (matrix) |
svg |
| 24 |
| AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer | 1e-8 | -2.010e+01 | 0.0000 | 68.0 | 13.26% | 2902.5 | 6.08% | motif file (matrix) |
svg |
| 25 |
| Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer | 1e-8 | -1.989e+01 | 0.0000 | 40.0 | 7.80% | 1263.3 | 2.64% | motif file (matrix) |
svg |
| 26 |
| Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer | 1e-8 | -1.977e+01 | 0.0000 | 61.0 | 11.89% | 2485.7 | 5.20% | motif file (matrix) |
svg |
| 27 |
| SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer | 1e-8 | -1.956e+01 | 0.0000 | 348.0 | 67.84% | 26357.2 | 55.17% | motif file (matrix) |
svg |
| 28 |
| Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer | 1e-8 | -1.925e+01 | 0.0000 | 53.0 | 10.33% | 2032.6 | 4.25% | motif file (matrix) |
svg |
| 29 |
| NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-8 | -1.879e+01 | 0.0000 | 50.0 | 9.75% | 1882.8 | 3.94% | motif file (matrix) |
svg |
| 30 |
| BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer | 1e-7 | -1.840e+01 | 0.0000 | 60.0 | 11.70% | 2517.4 | 5.27% | motif file (matrix) |
svg |
| 31 |
| Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer | 1e-7 | -1.827e+01 | 0.0000 | 48.0 | 9.36% | 1795.6 | 3.76% | motif file (matrix) |
svg |
| 32 |
| TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer | 1e-7 | -1.762e+01 | 0.0000 | 86.0 | 16.76% | 4319.3 | 9.04% | motif file (matrix) |
svg |
| 33 |
| Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer | 1e-7 | -1.691e+01 | 0.0000 | 231.0 | 45.03% | 16027.2 | 33.55% | motif file (matrix) |
svg |
| 34 |
| TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer | 1e-7 | -1.620e+01 | 0.0000 | 94.0 | 18.32% | 5038.0 | 10.55% | motif file (matrix) |
svg |
| 35 |
| Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer | 1e-6 | -1.518e+01 | 0.0000 | 77.0 | 15.01% | 3928.9 | 8.22% | motif file (matrix) |
svg |
| 36 |
| TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer | 1e-6 | -1.462e+01 | 0.0000 | 60.0 | 11.70% | 2813.9 | 5.89% | motif file (matrix) |
svg |
| 37 |
| Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer | 1e-6 | -1.392e+01 | 0.0000 | 43.0 | 8.38% | 1773.0 | 3.71% | motif file (matrix) |
svg |
| 38 |
| TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer | 1e-5 | -1.195e+01 | 0.0001 | 72.0 | 14.04% | 3919.4 | 8.20% | motif file (matrix) |
svg |
| 39 |
| TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer | 1e-5 | -1.166e+01 | 0.0001 | 50.0 | 9.75% | 2405.6 | 5.04% | motif file (matrix) |
svg |
| 40 |
| c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer | 1e-4 | -1.114e+01 | 0.0002 | 30.0 | 5.85% | 1167.2 | 2.44% | motif file (matrix) |
svg |
| 41 |
| Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer | 1e-4 | -1.042e+01 | 0.0003 | 11.0 | 2.14% | 216.9 | 0.45% | motif file (matrix) |
svg |
| 42 |
| NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer | 1e-4 | -9.977e+00 | 0.0005 | 142.0 | 27.68% | 9736.4 | 20.38% | motif file (matrix) |
svg |
| 43 |
| Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer | 1e-4 | -9.531e+00 | 0.0007 | 24.0 | 4.68% | 912.4 | 1.91% | motif file (matrix) |
svg |
| 44 |
| Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer | 1e-4 | -9.332e+00 | 0.0009 | 48.0 | 9.36% | 2496.5 | 5.23% | motif file (matrix) |
svg |
| 45 |
| Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer | 1e-3 | -8.654e+00 | 0.0017 | 29.0 | 5.65% | 1279.5 | 2.68% | motif file (matrix) |
svg |
| 46 |
| NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer | 1e-3 | -8.451e+00 | 0.0020 | 11.0 | 2.14% | 271.2 | 0.57% | motif file (matrix) |
svg |
| 47 |
| Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer | 1e-3 | -8.309e+00 | 0.0022 | 198.0 | 38.60% | 14928.7 | 31.25% | motif file (matrix) |
svg |
| 48 |
| Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer | 1e-3 | -7.787e+00 | 0.0037 | 46.0 | 8.97% | 2528.1 | 5.29% | motif file (matrix) |
svg |
| 49 |
| Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer | 1e-3 | -7.735e+00 | 0.0038 | 57.0 | 11.11% | 3345.1 | 7.00% | motif file (matrix) |
svg |
| 50 |
| Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer | 1e-3 | -7.332e+00 | 0.0056 | 9.0 | 1.75% | 216.9 | 0.45% | motif file (matrix) |
svg |
| 51 |
| ZNF341(Zf)/EBV-ZNF341-ChIP-Seq(GSE113194)/Homer | 1e-3 | -7.272e+00 | 0.0058 | 69.0 | 13.45% | 4333.9 | 9.07% | motif file (matrix) |
svg |
| 52 |
| Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer | 1e-3 | -7.056e+00 | 0.0071 | 55.0 | 10.72% | 3291.2 | 6.89% | motif file (matrix) |
svg |
| 53 |
| Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer | 1e-3 | -7.014e+00 | 0.0073 | 57.0 | 11.11% | 3449.2 | 7.22% | motif file (matrix) |
svg |
| 54 |
| JunD(bZIP)/K562-JunD-ChIP-Seq/Homer | 1e-2 | -6.794e+00 | 0.0089 | 11.0 | 2.14% | 332.3 | 0.70% | motif file (matrix) |
svg |
| 55 |
| KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer | 1e-2 | -6.638e+00 | 0.0102 | 129.0 | 25.15% | 9375.1 | 19.62% | motif file (matrix) |
svg |
| 56 |
| EBF2(EBF)/BrownAdipose-EBF2-ChIP-Seq(GSE97114)/Homer | 1e-2 | -6.592e+00 | 0.0105 | 68.0 | 13.26% | 4371.0 | 9.15% | motif file (matrix) |
svg |
| 57 |
| RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer | 1e-2 | -6.469e+00 | 0.0116 | 32.0 | 6.24% | 1681.7 | 3.52% | motif file (matrix) |
svg |
| 58 |
| FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer | 1e-2 | -5.523e+00 | 0.0295 | 39.0 | 7.60% | 2307.0 | 4.83% | motif file (matrix) |
svg |
| 59 |
| Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer | 1e-2 | -5.522e+00 | 0.0295 | 18.0 | 3.51% | 821.1 | 1.72% | motif file (matrix) |
svg |
| 60 |
| REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer | 1e-2 | -5.344e+00 | 0.0341 | 3.0 | 0.58% | 31.4 | 0.07% | motif file (matrix) |
svg |
| 61 |
| Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer | 1e-2 | -5.281e+00 | 0.0357 | 245.0 | 47.76% | 20084.0 | 42.04% | motif file (matrix) |
svg |
| 62 |
| EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer | 1e-2 | -5.126e+00 | 0.0410 | 19.0 | 3.70% | 921.5 | 1.93% | motif file (matrix) |
svg |
| 63 |
| BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer | 1e-2 | -5.034e+00 | 0.0442 | 95.0 | 18.52% | 6905.2 | 14.45% | motif file (matrix) |
svg |
| 64 |
| Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer | 1e-2 | -5.027e+00 | 0.0442 | 131.0 | 25.54% | 9982.8 | 20.90% | motif file (matrix) |
svg |
| 65 |
| Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer | 1e-2 | -4.993e+00 | 0.0447 | 118.0 | 23.00% | 8871.3 | 18.57% | motif file (matrix) |
svg |
| 66 |
| CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer | 1e-2 | -4.963e+00 | 0.0454 | 44.0 | 8.58% | 2774.1 | 5.81% | motif file (matrix) |
svg |
| 67 |
| Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer | 1e-2 | -4.883e+00 | 0.0484 | 18.0 | 3.51% | 876.3 | 1.83% | motif file (matrix) |
svg |
| 68 |
| THRb(NR)/HepG2-THRb.Flag-ChIP-Seq(Encode)/Homer | 1e-2 | -4.711e+00 | 0.0566 | 42.0 | 8.19% | 2661.3 | 5.57% | motif file (matrix) |
svg |
| 69 |
| Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer | 1e-2 | -4.682e+00 | 0.0575 | 6.0 | 1.17% | 164.9 | 0.35% | motif file (matrix) |
svg |
| 70 |
| MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer | 1e-2 | -4.660e+00 | 0.0579 | 37.0 | 7.21% | 2284.8 | 4.78% | motif file (matrix) |
svg |