Information for 2-TATATGGC (Motif 11)

G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C
Reverse Opposite:
A C T G A T G C A T G C G C T A A G C T C G T A C G A T C G T A
p-value:1e-5
log p-value:-1.309e+01
Information Content per bp:1.823
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.57%
Number of Background Sequences with motif1016.8
Percentage of Background Sequences with motif2.09%
Average Position of motif in Targets80.0 +/- 39.0bp
Average Position of motif in Background98.3 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.23
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NEUROD2/MA0668.1/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:reverse strand
Alignment:--TATATGGC
ACCATATGGC
 A C G T A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C
C T G A T G A C G T A C C T G A A C G T C T G A G A C T A T C G A C T G A G T C

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-TATATGGC---
CAAGATGGCGGC
 A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C A C G T A C G T A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer

Match Rank:3
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TATATGGC-
CCATATATGGNA
 A C G T A C G T A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C A C G T
A T G C A G T C G C T A C G A T C G T A G C A T G C T A C G A T C T A G C A T G T G A C G T C A

NEUROG2/MA0669.1/Jaspar

Match Rank:4
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TATATGGC
AACATATGTC
 A C G T A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C
T C G A T G C A G A T C C T G A A C G T T G C A G C A T A C T G A G C T A G T C

Atoh1/MA0461.2/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TATATGGC
AACATATGTT
 A C G T A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C
T C G A T G C A T G A C T C G A C A G T G T C A C G A T C A T G A C G T G A C T

YY2/MA0748.1/Jaspar

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TATATGGC----
-TAATGGCGGNC
 G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C A C G T A C G T A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

Bhlha15/MA0607.1/Jaspar

Match Rank:7
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TATATGGC
ACATATGG-
 A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C
T C G A A G T C C G T A A C G T G T C A A C G T A C T G A T C G A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--TATATGGC
NACATATGGN
 A C G T A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C
G T C A G T C A A G T C C G T A A G C T C T G A A C G T A C T G A C T G A G C T

Neurog1/MA0623.1/Jaspar

Match Rank:9
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--TATATGGC
ACCATATGGT
 A C G T A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C
C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

CDX2/MA0465.1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TATATGGC--
TTTTATGGCTN
 A C G T G C A T G C T A C G A T C T G A C G A T A T C G A T C G A G T C A C G T A C G T
A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T