Information for 2-CTCTCTCCCAGC (Motif 2)

A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C
Reverse Opposite:
A T C G A G T C A G C T A C T G A C T G A C T G C G T A A T C G G T C A A C T G C G T A A T C G
p-value:1e-9
log p-value:-2.226e+01
Information Content per bp:1.888
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif5.69%
Number of Background Sequences with motif58.0
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets121.7 +/- 37.2bp
Average Position of motif in Background104.9 +/- 57.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RBPJ/MA1116.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCTCTCCCAGC
--NNTTCCCANN
 A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C
A C G T A C G T A T G C A C G T C A G T G C A T T G A C T G A C A G T C C T G A A T C G T C A G

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:2
Score:0.60
Offset:2
Orientation:forward strand
Alignment:CTCTCTCCCAGC
--HTTTCCCASG
 A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C
A C G T A C G T G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.59
Offset:2
Orientation:forward strand
Alignment:CTCTCTCCCAGC-----
--ATTTCCCAGVAKSCY
 A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:CTCTCTCCCAGC--
----TGCCCAGNHW
 A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CTCTCTCCCAGC
CCCCTCCCCCAC-
 A C G T A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C
T A G C G T A C A G T C G T A C C G A T A G T C A G T C A G T C A G T C A G T C C G T A G A T C A C G T

E2F6/MA0471.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCTCTCCCAGC
NCTTCCCGCCC---
 A C G T A C G T A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCTCTCCCAGC---
ACCACTCTCGGTCAC
 A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:8
Score:0.56
Offset:5
Orientation:reverse strand
Alignment:CTCTCTCCCAGC--------
-----TCCCAGMCRAGCCCC
 A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A G T C A G T C A G T C C T G A T C A G T G C A G A T C T C G A C G T A A C T G A T G C G T A C G T A C G A T C

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTCTCTCCCAGC
TGACCTTTGCCCTAN-
 A C G T A C G T A C G T A C G T A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C
C G A T T A C G T G C A G T A C G A T C G A C T A G C T A C G T A T C G G T A C G A T C G A T C G A C T T C G A T A G C A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTCTCTCCCAGC
TKCTGTTCCA--
 A T G C A C G T A G T C A C G T A T G C A C G T A G T C A G T C A G T C C T G A A C T G T A G C
A C G T C A G T T A G C A G C T T A C G C G A T A C G T A G T C G T A C G T C A A C G T A C G T