Information for 4-ARTGKCTYCHTK (Motif 4)

C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
Reverse Opposite:
T G A C C T G A C G T A A C T G T C A G C G T A T A C G G T A C A G T C C G T A A G T C A C G T
p-value:1e-9
log p-value:-2.134e+01
Information Content per bp:1.735
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.57%
Number of Background Sequences with motif495.5
Percentage of Background Sequences with motif1.02%
Average Position of motif in Targets103.6 +/- 48.1bp
Average Position of motif in Background98.9 +/- 56.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---ARTGKCTYCHTK
AGAAATGACTTCCCT
 A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
C T G A C T A G T G C A C T G A T C G A A G C T C A T G T C G A A G T C G A C T A C G T A G T C G A T C G A T C G A C T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---ARTGKCTYCHTK
TTRAGTGSYK-----
 A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T A C G T A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.61
Offset:-7
Orientation:reverse strand
Alignment:-------ARTGKCTYCHTK
AATNTTAAGTGGNTNN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T A C G T A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ARTGKCTYCHTK-
NNGCGTGTGTGCNGCN
 A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G A C G T
C A G T A C G T C T A G T G A C C A T G A C G T T A C G A G C T C A T G A G C T A C T G A G T C A G T C C A T G A G T C G A C T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:5
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---ARTGKCTYCHTK
TTGAGTGSTT-----
 A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T A C G T A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------ARTGKCTYCHTK
AANTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ARTGKCTYCHTK
TGATTGGCTANN--
 A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----ARTGKCTYCHTK
NTCAAGTGGN------
 A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
A G C T G C A T A G T C C T G A G T C A A C T G C G A T C T A G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:9
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------ARTGKCTYCHTK
AATTTCAAGTGGCTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T A C G T A C G T

PH0114.1_Nkx2-5/Jaspar

Match Rank:10
Score:0.58
Offset:-7
Orientation:reverse strand
Alignment:-------ARTGKCTYCHTK
AAATTCAAGTGGNTTN---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C G T A C T G A C T G A T G C A C G T A G T C A G T C G C A T A G C T A C T G
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T A C G T A C G T