Information for 2-GTGAAAAATG (Motif 6)

A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G
Reverse Opposite:
G A T C G C T A C A G T A G C T C A G T G A C T G A C T T G A C C T G A T G A C
p-value:1e-8
log p-value:-1.846e+01
Information Content per bp:1.663
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif17.89%
Number of Background Sequences with motif2045.1
Percentage of Background Sequences with motif4.20%
Average Position of motif in Targets96.1 +/- 51.9bp
Average Position of motif in Background102.4 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-GTGAAAAATG
AATGGAAAAT-
 A C G T A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:GTGAAAAATG--
--GAACAATGGN
 A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G A C G T A C G T
A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

NFAT5/MA0606.1/Jaspar

Match Rank:3
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GTGAAAAATG
NATGGAAAAN-
 A C G T A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:4
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:GTGAAAAATG
-TGGAAAA--
 A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G
A C G T C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T

SOX13/MA1120.1/Jaspar

Match Rank:5
Score:0.66
Offset:2
Orientation:forward strand
Alignment:GTGAAAAATG---
--AAACAATGGCA
 A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G A C G T A C G T A C G T
A C G T A C G T C T G A T C G A C T G A A G T C G C T A C T G A G C A T C T A G T C A G T G A C G C T A

PB0070.1_Sox30_1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GTGAAAAATG-----
AATGAACAATGGAATT
 A C G T A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G A C G T A C G T A C G T A C G T A C G T
C T G A G C A T C A G T A T C G T C G A C G T A A G T C G C T A C T G A C G A T C A T G T C A G G C T A G T C A G A C T G A C T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:7
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGAAAAATG-
-TGATTGATGA
 A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G A C G T
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:8
Score:0.65
Offset:2
Orientation:forward strand
Alignment:GTGAAAAATG--
--RAACAATGGN
 A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G A C G T A C G T
A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

NFATC3/MA0625.1/Jaspar

Match Rank:9
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTGAAAAATG
AATGGAAAAT-
 A C G T A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:10
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GTGAAAAATG-
-VRAACAATGG
 A C T G G A C T A C T G C T G A C T G A G T C A T C G A G T C A C G A T C T A G A C G T
A C G T T G A C C T G A T C G A C G T A T A G C G T C A T C G A G C A T C T A G T A C G