Information for 3-TCTGAATAAG (Motif 8)

C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G
Reverse Opposite:
G T A C A G C T C G A T C T G A A C G T A G C T G T A C C G T A C T A G G T C A
p-value:1e-7
log p-value:-1.651e+01
Information Content per bp:1.744
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif10.57%
Number of Background Sequences with motif748.6
Percentage of Background Sequences with motif1.54%
Average Position of motif in Targets88.5 +/- 51.3bp
Average Position of motif in Background98.4 +/- 56.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0170.1_Sox17_2/Jaspar

Match Rank:1
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAATAAG---
NTTNTATGAATGTGNNC
 A C G T A C G T A C G T A C G T C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G A C G T A C G T A C G T
G C T A G C A T A G C T C T A G A G C T T C G A A G C T A C T G G C T A C T G A C G A T T C A G C A G T C A T G T C A G C G A T A T G C

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-TCTGAATAAG
ATTTGAATT--
 A C G T C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer

Match Rank:3
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-TCTGAATAAG-
TGCTGASTCAGC
 A C G T C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G A C G T
A C G T A T C G T G A C G C A T C A T G C G T A T A G C G A C T G A T C C T G A A T C G A G T C

PB0178.1_Sox8_2/Jaspar

Match Rank:4
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----TCTGAATAAG
NNTNTCATGAATGT-
 A C G T A C G T A C G T A C G T A C G T C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G
A T G C T A C G C A G T A C T G C G A T G A T C T G C A A G C T C T A G C G T A T C G A C G A T C T A G G A C T A C G T

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCTGAATAAG--
NNNTATTGAATTGNNN
 A C G T A C G T A C G T A C G T C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G A C G T A C G T
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T

LBX1/MA0618.1/Jaspar

Match Rank:6
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCTGAATAAG
--TTAATTAG
 C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G
A C G T A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G

Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCTGAATAAG--
DATGASTCATNN
 C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G A C G T A C G T
C A T G T C G A C G A T C A T G G C T A T A G C C G A T G T A C G C T A A G C T G A T C T G A C

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TCTGAATAAG-
-ATGMATATDC
 C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G A C G T
A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:9
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:TCTGAATAAG--
--TGACTCAGCA
 C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G A C G T A C G T
A C G T A C G T A G C T A C T G C G T A A T G C C G A T G T A C C T G A A C T G A T G C G C T A

NKX6-1/MA0674.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:TCTGAATAAG
--TTAATTAN
 C A G T A G T C A C G T A C T G C T G A C G T A G A C T G C T A C T G A C A T G
A C G T A C G T C G A T A G C T C G T A C G T A C A G T C A G T C T G A A T G C