Information for 6-CTTGACCCTGAC (Motif 10)

A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
Reverse Opposite:
A C T G C G A T A G T C C G T A C T A G C T A G T A C G G C A T A G T C C G T A C T G A A C T G
p-value:1e-8
log p-value:-2.053e+01
Information Content per bp:1.760
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.63%
Number of Background Sequences with motif142.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets91.7 +/- 60.3bp
Average Position of motif in Background85.4 +/- 58.9bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer

Match Rank:1
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CTTGACCCTGAC--
--TGACCTTGACCT
 A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C A C G T A C G T
A C G T A C G T G A C T T C A G T G C A A G T C A G T C G A C T A C G T T A C G C G T A G T A C G A T C G A C T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:2
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----CTTGACCCTGAC
TGACCTTGACCT----
 A C G T A C G T A C G T A C G T A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:3
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CTTGACCCTGAC
--TGACCTTGAV
 A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

PB0157.1_Rara_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CTTGACCCTGAC--
NNCNTGACCCCGCTCT
 A C G T A C G T A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C A C G T A C G T
A C G T T G C A T G A C C A G T G A C T T C A G C G T A G T A C G T A C A T G C T A G C T C A G G T A C C A G T G T A C C A G T

ESRRB/MA0141.3/Jaspar

Match Rank:5
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:CTTGACCCTGAC
NATGACCTTGA-
 A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:6
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CTTGACCCTGAC
-ATGACCTTGA-
 A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CTTGACCCTGAC
BNTGDCCTTG--
 A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CTTGACCCTGAC
--TGACCT----
 A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T

PB0153.1_Nr2f2_2/Jaspar

Match Rank:9
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--CTTGACCCTGAC--
NNNNTGACCCGGCGCG
 A C G T A C G T A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C A C G T A C G T
C G A T T C G A T A G C A T C G A G C T T C A G G T C A G T A C G T A C A G T C T A C G T C A G G T A C A C T G G T A C A C T G

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.62
Offset:1
Orientation:forward strand
Alignment:CTTGACCCTGAC
-NTGACCTTGA-
 A G T C G A C T A C G T T A C G C G T A A T G C A G T C A G T C C G A T T A C G G C T A A G T C
A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T