Information for 7-SAAGCCTGKCAT (Motif 12)

A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
Reverse Opposite:
C T G A C G A T A T C G G T A C T A G C C G T A A C T G A C T G A T G C A G C T G C A T A T C G
p-value:1e-8
log p-value:-1.912e+01
Information Content per bp:1.708
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.63%
Number of Background Sequences with motif165.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets97.7 +/- 61.0bp
Average Position of motif in Background97.3 +/- 59.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Nr2e3/MA0164.1/Jaspar

Match Rank:1
Score:0.66
Offset:0
Orientation:forward strand
Alignment:SAAGCCTGKCAT
CAAGCTT-----
 A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
G A T C C G T A C G T A A T C G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:SAAGCCTGKCAT
-AGGCCTNG---
 A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:SAAGCCTGKCAT
-CAGCC------
 A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:SAAGCCTGKCAT
-AGGCCTAG---
 A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:SAAGCCTGKCAT--
CAGGCCNNGGCCNN
 A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T A C G T A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

POL008.1_DCE_S_I/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-SAAGCCTGKCAT
NGAAGC-------
 A C G T A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
T A C G T A C G T G C A T C G A T A C G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:7
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----SAAGCCTGKCAT
NNGGCCACGCCTTTN--
 A C G T A C G T A C G T A C G T A C G T A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G A C G T A C G T

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--SAAGCCTGKCAT
AGCGCGCC------
 A C G T A C G T A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:SAAGCCTGKCAT--
--TGTCTGDCACCT
 A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T A C G T A C G T
A C G T A C G T G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---SAAGCCTGKCAT
NNACTTGCCTT----
 A C G T A C G T A C G T A T G C C G T A C T G A A T C G A G T C G T A C C G A T A T C G C A T G T A G C G C T A A G C T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T