Information for 3-AAAGGGCT (Motif 15)

T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T
Reverse Opposite:
C T G A T A C G A T G C A G T C A T G C G C A T A C G T A G C T
p-value:1e-7
log p-value:-1.613e+01
Information Content per bp:1.796
Number of Target Sequences with motif62.0
Percentage of Target Sequences with motif28.70%
Number of Background Sequences with motif7198.7
Percentage of Background Sequences with motif14.71%
Average Position of motif in Targets98.1 +/- 54.8bp
Average Position of motif in Background99.6 +/- 64.1bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.70
Offset:2
Orientation:forward strand
Alignment:AAAGGGCT--
--AGGCCTNG
 T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T A C G T
A C G T A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:AAAGGGCT--
--AGGCCTAG
 T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T A C G T
A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G

NR4A1/MA1112.1/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AAAGGGCT-
AAAAGGTCAC
 A C G T T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T
C G T A C T G A C G T A G T C A A T C G T C A G A G C T G T A C C T G A G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AAAGGGCT-
----NGCTN
 T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T
A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G

PB0137.1_Irf3_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGCT--
GGAGAAAGGTGCGA
 A C G T A C G T A C G T A C G T T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T A C G T
C T A G C A T G C G T A C T A G C G T A G C T A C G T A A T C G T A C G C G A T A T C G A G T C C T A G C T G A

ZNF652/HepG2-ZNF652.Flag-ChIP-Seq(Encode)/Homer

Match Rank:6
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAAGGGCT--
NMMNBAAAGGGTTAA
 A C G T A C G T A C G T A C G T A C G T T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T A C G T
T A C G T G C A G T C A G C A T A C T G T G C A T C G A C T G A C A T G C T A G A C T G C A G T G A C T C G T A G T C A

ERRg(NR)/Kidney-ESRRG-ChIP-Seq(GSE104905)/Homer

Match Rank:7
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGGCT-
NBYCAAGGTCAC
 A C G T A C G T A C G T T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T
A T C G A T G C A G C T T A G C T C G A C T G A C T A G A C T G C A G T A T G C C T G A G T A C

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAAGGGCT
ANGNAAAGGTCA
 A C G T A C G T A C G T A C G T T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T
C T G A A C T G C A T G C A G T C G T A C G T A C G T A A C T G A C T G A C G T A G T C C G T A

Sox2/MA0143.3/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAAGGGCT
AACAAAGG---
 A C G T A C G T A C G T T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T
T C G A C G T A A G T C C G T A C G T A C G T A A C T G A C T G A C G T A C G T A C G T

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AAAGGGCT----
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T T C G A G T C A C G T A T A C G A C T G T A C G A T G C A G C T A C G T A C G T A C G T A C G T
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G