Information for 9-CCACTAGGCTCG (Motif 21)

G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
Reverse Opposite:
A G T C A C T G C G T A C T A G A T G C A G T C A C G T C G T A A C T G A C G T A T C G A C T G
p-value:1e-5
log p-value:-1.155e+01
Information Content per bp:1.937
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.93%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets60.0 +/- 14.0bp
Average Position of motif in Background151.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL001.1_MTE/Jaspar

Match Rank:1
Score:0.62
Offset:-4
Orientation:reverse strand
Alignment:----CCACTAGGCTCG---
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

ZKSCAN1(Zf)/HepG2-ZKSCAN1-ChIP-Seq(Encode)/Homer

Match Rank:2
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCACTAGGCTCG
RGMCCTACTRTGTGC-
 A C G T A C G T A C G T A C G T G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
C T A G T C A G T G C A A G T C A G T C A G C T C G T A G T A C A G C T T C G A A G C T A T C G A G C T C T A G G A T C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGCTCG
ATCCAC--------
 A C G T A C G T G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CCACTAGGCTCG----
CTACTAGGATGTNNTN
 G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G A C G T A C G T A C G T A C G T
A G T C G C A T C G T A T G A C C G A T T C G A T A C G C A T G C G T A G A C T C T A G G A C T C G A T T C G A G C A T G A T C

MYCN/MA0104.4/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGCTCG
GGCCACGTGGCC--
 A C G T A C G T G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
T A C G T C A G T A G C T G A C C T G A A G T C T C A G G A C T A C T G A T C G A G T C A T G C A C G T A C G T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:CCACTAGGCTCG
NNACTTGCCTT-
 G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGGCTCG
ACCACTTGAA---
 A C G T G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGGCTCG
MRSCACTYAA----
 A C G T A C G T G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CCACTAGGCTCG
------NGCTN-
 G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G
A C G T A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T

POL006.1_BREu/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CCACTAGGCTCG--
------GGCGCGCT
 G T A C A T G C C G T A A G T C A C G T C G T A A C T G A T C G A G T C A C G T A G T C A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T