Information for 5-TGGACAAGAGAC (Motif 8)

A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G C T A T G C A C G T A C G T A C T G A C G T A T G C A G T C G T C A
p-value:1e-9
log p-value:-2.109e+01
Information Content per bp:1.854
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.70%
Number of Background Sequences with motif64.2
Percentage of Background Sequences with motif0.13%
Average Position of motif in Targets89.4 +/- 69.2bp
Average Position of motif in Background104.2 +/- 60.9bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0200.1_Zfp187_2/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TGGACAAGAGAC-
NNAGGGACAAGGGCNC
 A C G T A C G T A C G T A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C A C G T
A G C T C G A T C T G A C A T G C T A G C T A G C G T A A G T C T C G A C T G A C T A G C T A G C A T G A G T C G A C T G T A C

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TGGACAAGAGAC
TTTGCACACGGCAC
 A C G T A C G T A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C
C A G T A C G T G A C T T C A G G T A C C G T A T A G C G T C A A G T C C A T G C A T G A G T C T G C A G A T C

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TGGACAAGAGAC
-GAACAATGGN-
 A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C
A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G A C G T

PB0173.1_Sox21_2/Jaspar

Match Rank:4
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----TGGACAAGAGAC-
NNNNNGAACAATTGANN
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C A C G T
A G C T G T C A C T A G G T A C A C T G T A C G T C G A C G T A A T G C C G T A T C G A G C A T C G A T T A C G T C G A A G C T A C G T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TGGACAAGAGAC
-RAACAATGGN-
 A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGACAAGAGAC--
AGAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C A C G T A C G T
G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:7
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:TGGACAAGAGAC
--RACAAWGG--
 A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T

PB0183.1_Sry_2/Jaspar

Match Rank:8
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TGGACAAGAGAC-
TCACGGAACAATAGGTG
 A C G T A C G T A C G T A C G T A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C A C G T
G A C T G A T C C G T A G T A C C A T G T C A G T G C A C G T A A G T C C T G A C G T A G C A T C T G A C T A G T C A G G A C T T A C G

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TGGACAAGAGAC--
ATAAGAACAAAGGACTA
 A C G T A C G T A C G T A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C A C G T A C G T
G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:TGGACAAGAGAC----
TGACCCAGTGACCTAC
 A C G T A C T G A T C G C G T A A G T C G T C A C G T A A T C G C T G A C T A G C G T A A G T C A C G T A C G T A C G T A C G T
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C