Information for 1-CCACCAGGTGGC (Motif 1)

A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C
Reverse Opposite:
A C T G G T A C A G T C G T C A A G T C A G T C A C G T C T A G A T C G A C G T A T C G A C T G
p-value:1e-33
log p-value:-7.634e+01
Information Content per bp:1.820
Number of Target Sequences with motif41.0
Percentage of Target Sequences with motif6.07%
Number of Background Sequences with motif199.1
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets95.7 +/- 47.2bp
Average Position of motif in Background97.2 +/- 58.6bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CCACCAGGTGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:forward strand
Alignment:---CCACCAGGTGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.88
Offset:-1
Orientation:reverse strand
Alignment:-CCACCAGGTGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.76
Offset:1
Orientation:forward strand
Alignment:CCACCAGGTGGC---
-CACCAGGGGGCACC
 A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C G T A C G T A C G T
A C G T T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGC
--AACAGATGGC
 A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

FIGLA/MA0820.1/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGC
--AACAGGTGNT
 A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C
A C G T A C G T G C T A T G C A G T A C G C T A A T C G A T C G C A G T C T A G C A T G C G A T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CCACCAGGTGGC
--NNCAGGTGNN
 A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C
A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

SCRT1/MA0743.1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CCACCAGGTGGC-
GAGCAACAGGTGGTT
 A C G T A C G T A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C G T
T C A G G C T A A C T G G A T C G T C A C G T A G T A C C G T A C T A G A C T G A G C T C A T G A C T G A G C T G A C T

ZEB1/MA0103.3/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CCACCAGGTGGC
-NNGCAGGTGNN
 A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C
A C G T T A C G A T G C T A C G A G T C T C G A A T C G T C A G G A C T T C A G T A C G T A C G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCACCAGGTGGC-
DCHCAGCAGGRGGCC
 A C G T A C G T A G T C A T G C C G T A A T G C G A T C C G T A A C T G C T A G A C G T A C T G A C T G T G A C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C