Information for 13-GCAGTGCAGCAG (Motif 11)

A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G
Reverse Opposite:
A G T C A G C T A C T G A G T C A C G T A C T G A G T C C G T A A G T C A C G T A C T G A G T C
p-value:1e-8
log p-value:-2.033e+01
Information Content per bp:1.950
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets120.0 +/- 40.1bp
Average Position of motif in Background195.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0091.1_Zbtb3_1/Jaspar

Match Rank:1
Score:0.67
Offset:-6
Orientation:reverse strand
Alignment:------GCAGTGCAGCAG
NNNANTGCAGTGCNNTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T

Zfp57(Zf)/H1-ZFP57.HA-ChIP-Seq(GSE115387)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCAGTGCAGCAG
-NANTGCSGCA-
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G
A C G T G A T C G C T A C A G T A C G T T A C G A G T C A T G C C T A G A G T C T C G A A C G T

ASCL1/MA1100.1/Jaspar

Match Rank:3
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCAGTGCAGCAG---
--GCAGCAGCTGGCG
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T T A C G T A G C C T G A T C A G T A G C C G T A A T C G T A G C A C G T A T C G A T C G A T G C T A C G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCAGTGCAGCAG---
-----NCAGCTGCTG
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:5
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCAGTGCAGCAG
----ANCAGCTG
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G
A C G T A C G T A C G T A C G T C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G

Ascl2(bHLH)/ESC-Ascl2-ChIP-Seq(GSE97712)/Homer

Match Rank:6
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:GCAGTGCAGCAG----
----DGCAGCTGCYSS
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G T C G A T C A T G C A T G C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:GCAGTGCAGCAG---
-----GCAGCTGTNN
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GCAGTGCAGCAG----
----AGCAGCTGCTNN
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Ascl2/MA0816.1/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCAGTGCAGCAG--
----AGCAGCTGCT
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:GCAGTGCAGCAG----
-CCACACAGCAGGAGA
 A C T G A G T C C G T A A C T G A C G T A C T G A G T C C G T A A C T G G T A C C T G A A C T G A C G T A C G T A C G T A C G T
A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A