Information for 5-GAGTAATT (Motif 14)

T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T
Reverse Opposite:
C G T A C T G A C G A T G A C T G C T A T A G C C G A T A T G C
p-value:1e-8
log p-value:-1.927e+01
Information Content per bp:1.586
Number of Target Sequences with motif201.0
Percentage of Target Sequences with motif29.73%
Number of Background Sequences with motif9947.8
Percentage of Background Sequences with motif20.33%
Average Position of motif in Targets97.7 +/- 56.9bp
Average Position of motif in Background99.9 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0010.1_Homeobox_class/Jaspar

Match Rank:1
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GAGTAATT
-AATAATT
 T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T
A C G T G C T A C G T A G C A T C T G A C T G A C G A T C G A T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GAGTAATT--
CNGTGATTTN
 T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T A C G T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

MEOX2/MA0706.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:GAGTAATT---
-AGTAATTAAC
 T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T A C G T A C G T
A C G T C T G A T A C G G A C T T G C A G T C A C A G T A G C T C T G A C G T A T G A C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:4
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GAGTAATT
TTAAGTGCTT
 A C G T A C G T T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T
A C G T C A G T T C G A C G T A A C T G A C G T C T A G A T G C A G C T A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-GAGTAATT-
GCAGTGATTT
 A C G T T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PH0055.1_Hoxa7_2/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GAGTAATT-------
GTAGTAATTAATGGAA
 A C G T T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G A C G T T G C A A C T G G C A T G T C A C G T A A C G T C A G T C G T A T G C A A C G T T C A G A T C G G T C A T G C A

Dlx3(Homeobox)/Kerainocytes-Dlx3-ChIP-Seq(GSE89884)/Homer

Match Rank:7
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GAGTAATT----
--GTAATTACHN
 T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G C T C G T A C G T A A C G T A C G T C T G A T G A C G T C A A G C T

PH0024.1_Dlx5/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGTAATT-------
GGGGTAATTAGCTCTG
 A C G T T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

PH0062.1_Hoxb7/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGTAATT-------
GTAGTAATTAATGCAA
 A C G T T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G A G C T T G C A A C T G G A C T G T C A G C T A C G A T C A G T C T G A T G C A A C G T C A T G A T G C G C T A C T G A

PH0008.1_Barx2/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAGTAATT-------
TAAGTAATTAGTTATA
 A C G T T A C G G C T A A T C G C G A T C T G A G C T A A G C T G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C G A T G C T A T C G A A C T G G A C T G T C A G C T A C A G T C A G T C T G A T C A G A G C T A C G T C T G A G A C T C T G A