Information for 1-ATCTTGGCAG (Motif 2)

T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G
Reverse Opposite:
T G A C G C A T A C T G T G A C G A T C C T G A T C G A A T C G G C T A A G C T
p-value:1e-19
log p-value:-4.428e+01
Information Content per bp:1.654
Number of Target Sequences with motif78.0
Percentage of Target Sequences with motif11.54%
Number of Background Sequences with motif1697.8
Percentage of Background Sequences with motif3.47%
Average Position of motif in Targets104.0 +/- 54.7bp
Average Position of motif in Background101.3 +/- 61.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.2/Jaspar

Match Rank:1
Score:0.86
Offset:0
Orientation:forward strand
Alignment:ATCTTGGCAG-
TACTTGGCAGA
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

NFIA/MA0670.1/Jaspar

Match Rank:2
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:ATCTTGGCAG-
-NNTTGGCANN
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G A C G T
A C G T G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.78
Offset:2
Orientation:reverse strand
Alignment:ATCTTGGCAG
--CTTGGCAA
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G
A C G T A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:ATCTTGGCAG-
--NTTGGCANN
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATCTTGGCAG
WDNCTGGGCA-
 A C G T T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G
G C A T C T A G G T A C A G T C C G A T A C T G C T A G C T A G G T A C G C T A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:6
Score:0.65
Offset:3
Orientation:forward strand
Alignment:ATCTTGGCAG-
---TTGACAGC
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

Hic1/MA0739.1/Jaspar

Match Rank:7
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:ATCTTGGCAG
-GGTTGGCAT
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

THAP1/MA0597.1/Jaspar

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ATCTTGGCAG
-TNNGGGCAG
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G
A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.63
Offset:-7
Orientation:forward strand
Alignment:-------ATCTTGGCAG
NNTGTTTATTTTGGCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATCTTGGCAG-
---TTGACAGG
 T C G A C G A T T A G C A G C T G A C T C T A G A C T G T G A C C G T A A C T G A C G T
A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G