Information for 18-TTAGGGKAAG (Motif 25)

G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
Reverse Opposite:
G T A C A G C T C G A T G T C A G T A C A G T C A G T C A G C T C G T A C T G A
p-value:1e-5
log p-value:-1.208e+01
Information Content per bp:1.652
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.78%
Number of Background Sequences with motif168.7
Percentage of Background Sequences with motif0.34%
Average Position of motif in Targets107.1 +/- 49.2bp
Average Position of motif in Background93.0 +/- 56.7bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.92
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Barhl1/MA0877.1/Jaspar

Match Rank:1
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGGKAAG
NNCAATTANN-----
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TTAGGGKAAG
BCMATTAG------
 A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

BARX1/MA0875.1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTAGGGKAAG
GCAATTAG------
 A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
T C A G G A T C T G C A T G C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TTAGGGKAAG
CCAATTAA------
 A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

HOXB3/MA0903.1/Jaspar

Match Rank:5
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----TTAGGGKAAG
ACTAATTAGC-----
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
C T G A T A G C G A C T T G C A T C G A A G C T G A C T G C T A T C A G T G A C A C G T A C G T A C G T A C G T A C G T

PB0128.1_Gcm1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TTAGGGKAAG--
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

PDX1/MA0132.2/Jaspar

Match Rank:7
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TTAGGGKAAG
GTAATTAG------
 A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
T A C G G A C T T G C A G T C A A C G T A C G T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:8
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TTAGGGKAAG
GGAGGGGGAA
 G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

GSC/MA0648.1/Jaspar

Match Rank:9
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----TTAGGGKAAG
NNGGATTAGN-----
 A C G T A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T A C G T

PH0039.1_Mnx1/Jaspar

Match Rank:10
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------TTAGGGKAAG
GTACTAATTAGTGGCG-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T A C G T C T G A T C A G T C A G C A T G C A G T G C T A T C G A A C T G
A C T G A C G T T G C A A T G C G A C T G T C A C G T A G A C T A C G T C T G A A T C G A C G T C T A G T A C G G A T C T A C G A C G T