Information for 13-AACACACT (Motif 26)

C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T
Reverse Opposite:
C T G A A C T G G C A T A C T G A C G T A C T G A C G T A C G T
p-value:1e-5
log p-value:-1.180e+01
Information Content per bp:1.907
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.80%
Number of Background Sequences with motif1643.4
Percentage of Background Sequences with motif3.36%
Average Position of motif in Targets86.7 +/- 56.8bp
Average Position of motif in Background99.2 +/- 59.1bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.30
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL007.1_BREd/Jaspar

Match Rank:1
Score:0.70
Offset:0
Orientation:reverse strand
Alignment:AACACACT
NANANAC-
 C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T
T G C A T G C A T G A C T G C A G T C A T C G A G A T C A C G T

KLF4/MA0039.3/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-AACACACT--
CCACACCCTGC
 A C G T C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T A C G T
T G A C T G A C T C G A G T A C C T G A A G T C T G A C G A T C G C A T A T C G G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----AACACACT---
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

ZSCAN4/MA1155.1/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--AACACACT-----
TGCACACACTGAAAA
 A C G T A C G T C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T A C G T A C G T A C G T A C G T
G A C T T C A G A T G C C G T A A G T C C G T A G A T C T G C A G T A C A C G T A C T G C G T A G T C A C T G A C T G A

GLI2/MA0734.1/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---AACACACT-
GCGACCACACTG
 A C G T A C G T A C G T C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AACACACT---
-MRSCACTYAA
 C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

PB0016.1_Foxj1_1/Jaspar

Match Rank:7
Score:0.61
Offset:-6
Orientation:forward strand
Alignment:------AACACACT--
AAAGTAAACAAAAATT
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T A C G T
G C T A C G A T G C T A C T A G G A C T G T C A G C T A C G T A G A T C C G T A G T C A C G T A G T C A C G T A C A G T C A G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:8
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AACACACT-
NWAACCACADNN
 A C G T A C G T A C G T C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AACACACT---
-AASCACTCAA
 C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T A C G T A C G T
A C G T C T G A C T G A T A G C G A T C G C T A G T A C A C G T G A T C T G C A C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AACACACT--
SSAATCCACANN
 A C G T A C G T C G T A C G T A G T A C C G T A A G T C C G T A A G T C A G C T A C G T A C G T
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C