Information for 21-AGAGACAGAGAT (Motif 30)

C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T
Reverse Opposite:
C G T A C G A T A T G C A C G T A G T C A C G T A C T G C G A T A G T C A C G T A G T C A C G T
p-value:1e-3
log p-value:-7.292e+00
Information Content per bp:1.937
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.59%
Number of Background Sequences with motif28.4
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets114.3 +/- 64.7bp
Average Position of motif in Background104.4 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)2.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:1
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AGAGACAGAGAT--
--RHHCAGAGAGGB
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T
A C G T A C G T T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AGAGACAGAGAT
AGGTGHCAGACA-
 A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AGAGACAGAGAT
-GAGSCCGAGC-
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T
A C G T A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T

GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AGAGACAGAGAT---
AGATGKDGAGATAAG
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T A C G T
C G T A A C T G G T C A A C G T A T C G C A G T C T A G T C A G C G T A A C T G C G T A A C G T C G T A C T G A T A C G

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-AGAGACAGAGAT
AGGTGNCAGACAG
 A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PBX3/MA1114.1/Jaspar

Match Rank:6
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----AGAGACAGAGAT
GGGTGAGTGACAGGCGG
 A C G T A C G T A C G T A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T
T A C G A C T G A C T G C G A T T C A G C G T A A C T G C A G T T A C G C T G A T A G C C T G A A C T G T A C G A T G C T C A G A T C G

PB0166.1_Sox12_2/Jaspar

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGAGACAGAGAT--
AAACAGACAAAGGAAT
 A C G T A C G T C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T
T G C A T G C A C G T A A G C T C T G A A T C G C G T A A G T C G C T A T C G A G C T A T A C G T C A G T G C A C G T A G A C T

PB0138.1_Irf4_2/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGAGACAGAGAT----
-GNNACCGAGAATNNN
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:AGAGACAGAGAT--
----GCAGTGATTT
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T

PB0140.1_Irf6_2/Jaspar

Match Rank:10
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AGAGACAGAGAT----
-NNNACCGAGAGTNNN
 C G T A A C T G C G T A A C T G C G T A A G T C C G T A A C T G C G T A A T C G C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T