Information for 25-GATTTTCTGAGG (Motif 34)

A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C C G T A A C T G C G T A C G T A C G T A C G T A A C G T A G T C
p-value:1e-1
log p-value:-2.707e+00
Information Content per bp:1.963
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif5.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets101.5 +/- 34.7bp
Average Position of motif in Background89.1 +/- 64.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)4.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0068.1_Hoxc13/Jaspar

Match Rank:1
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-GATTTTCTGAGG---
NAATTTTACGAGNTNN
 A C G T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
G C T A C T G A C G T A C G A T C G A T C G A T C G A T C T G A G A T C C T A G C T G A A T C G T G A C C G A T C G A T C G A T

HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer

Match Rank:2
Score:0.72
Offset:2
Orientation:forward strand
Alignment:GATTTTCTGAGG
--TTTTATKRGG
 A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
A C G T A C G T C G A T A C G T A C G T A C G T C G T A A G C T C A G T C T A G A T C G A C T G

PH0048.1_Hoxa13/Jaspar

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GATTTTCTGAGG---
ANATTTTACGAGNNNN
 A C G T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G A C G T A C G T A C G T
G C T A T C G A C G T A C G A T C A G T C G A T C G A T C T G A A G T C C T A G C T G A A T C G T A C G C G A T G C A T C G A T

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GATTTTCTGAGG
-NTTTTACGAGN
 A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
A C G T C G A T C G A T C G A T C G A T G C A T G T C A A G T C C T A G T C G A A T C G T G A C

Hoxd13(Homeobox)/ChickenMSG-Hoxd13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:5
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GATTTTCTGAGG
--TTTTATTRGN
 A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
A C G T A C G T C G A T A C G T A C G T G C A T C G T A G A C T C A G T C T A G A T C G G A T C

HOXD13/MA0909.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GATTTTCTGAGG
-NTTTTATTGG-
 A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
A C G T C A G T C A G T A C G T C G A T C G A T C T G A G C A T C A G T C T A G T A C G A C G T

HOXC10/MA0905.1/Jaspar

Match Rank:7
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GATTTTCTGAGG
-NTTTTACGAC-
 A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
A C G T C G T A C G A T G C A T G C A T C G A T C G T A G A T C C A T G C T G A A G T C A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GATTTTCTGAGG
-ATTTCCTGTN-
 A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T

Hoxa13(Homeobox)/ChickenMSG-Hoxa13.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:9
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GATTTTCTGAGG
-NTTTTATDRG-
 A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G
A C G T C T A G G C A T A C G T G C A T G A C T C G T A G A C T C A T G C T A G A T C G A C G T

PH0057.1_Hoxb13/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--GATTTTCTGAGG--
NNAATTTTATTGGNTN
 A C G T A C G T A C T G C G T A A C G T A C G T A C G T A C G T G T A C A C G T A C T G C G T A A C T G A C T G A C G T A C G T
A T G C C T A G C G T A C G T A A C G T C G A T C G A T G C A T C T G A G A C T C A G T C T A G T A C G C A T G G A C T A C G T