Information for 11-GGTGCDGTCBAT (Motif 9)

A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T
Reverse Opposite:
C G T A A C G T T A C G A C T G C G T A A G T C G C T A A C T G A G T C C G T A A T G C A G T C
p-value:1e-9
log p-value:-2.161e+01
Information Content per bp:1.847
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.89%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets65.8 +/- 32.8bp
Average Position of motif in Background138.4 +/- 43.3bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hnf6b(Homeobox)/LNCaP-Hnf6b-ChIP-Seq(GSE106305)/Homer

Match Rank:1
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GGTGCDGTCBAT-
-----RRTCAATA
 A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T G A A G C T G T A C C T G A C G T A A C G T C G T A

PBX2/MA1113.1/Jaspar

Match Rank:2
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGTGCDGTCBAT---
---NCTGTCAATCAN
 A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A T G C T A G C G A C T T C A G G A C T T G A C G T C A T G C A G A C T G T A C G C T A A G T C

PRDM10(Zf)/HEK293-PRDM10.eGFP-ChIP-Seq(Encode)/Homer

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GGTGCDGTCBAT
TGGTACATTCCA-
 A C G T A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T
C G A T C T A G T C A G C A G T C G T A A G T C G C T A A C G T G A C T A T G C A G T C G C T A A C G T

PH0169.1_Tgif1/Jaspar

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GGTGCDGTCBAT---
NNNCAGCTGTCAATATN
 A C G T A C G T A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C

PH0141.1_Pknox2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--GGTGCDGTCBAT--
AAGCACCTGTCAATAT
 A C G T A C G T A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GGTGCDGTCBAT--------
GGAGCTGTCCATGGTGCTGA
 A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGTGCDGTCBAT--
GGGCGATGACCAYTC
 A C G T A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T
C T A G T A C G T C A G A G T C A C T G T G C A A G C T A C T G G T C A G T A C G A T C C T G A A G T C A C G T A T G C

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GGTGCDGTCBAT
---GCTGTCAA-
 A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T
A C G T A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T

REST/MA0138.2/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GGTGCDGTCBAT---------
GGCGCTGTCCATGGTGCTGAA
 A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

PH0170.1_Tgif2/Jaspar

Match Rank:10
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--GGTGCDGTCBAT--
AACTAGCTGTCAATAC
 A C G T A C G T A C T G A T C G A C G T A C T G G T A C C G A T A C T G A C G T A G T C A G T C C G T A A C G T A C G T A C G T
G C T A C G T A A T G C A G C T C T G A A T C G G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T T G C A T A G C