Information for 1-CCACTAGGTGGC (Motif 1)

A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C
Reverse Opposite:
A T C G A G T C A G T C T G C A A G T C A G T C C G A T C T G A A T C G C G A T A C T G C T A G
p-value:1e-27
log p-value:-6.329e+01
Information Content per bp:1.753
Number of Target Sequences with motif37.0
Percentage of Target Sequences with motif5.92%
Number of Background Sequences with motif228.5
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets99.2 +/- 50.2bp
Average Position of motif in Background101.7 +/- 56.7bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGTGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---CCACTAGGTGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-CCACTAGGTGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCACTAGGTGGC---
-CACCAGGGGGCACC
 A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C A C G T A C G T A C G T
A C G T T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

GLIS3(Zf)/Thyroid-Glis3.GFP-ChIP-Seq(GSE103297)/Homer

Match Rank:5
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCACTAGGTGGC--
CTCCCTGGGAGGCCN
 A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C A C G T A C G T
T A G C G C A T A G T C G A T C A T G C G A C T C T A G A C T G A C T G C T G A A C T G C T A G A G T C T G A C C G A T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:6
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:CCACTAGGTGGC
--AACAGATGGC
 A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C
A C G T A C G T C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGGTGGC-
DCHCAGCAGGRGGCC
 A C G T A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CCACTAGGTGGC
CACCCCCGGGGGGG
 A C G T A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

Znf423/MA0116.1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CCACTAGGTGGC
GCACCCCTGGGTGCC
 A C G T A C G T A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C
A C T G T G A C G T C A G T A C A G T C A G T C G A T C C G A T C T A G A C T G A C T G A C G T A C T G A T G C A G T C

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--CCACTAGGTGGC-
NCNCAGCGGGGGGTC
 A C G T A C G T A G T C A G T C G C T A A T G C A G C T C G T A A C T G T C A G A C G T A C T G C T A G T A G C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C