Information for 11-TATGCATTAC (Motif 17)

G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C
Reverse Opposite:
A T C G A G C T C T G A C G T A A C G T A C T G T A G C C G T A A C G T C G T A
p-value:1e-10
log p-value:-2.311e+01
Information Content per bp:1.833
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif99.0
Percentage of Background Sequences with motif0.20%
Average Position of motif in Targets98.9 +/- 59.1bp
Average Position of motif in Background106.0 +/- 51.4bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:1
Score:0.74
Offset:-3
Orientation:reverse strand
Alignment:---TATGCATTAC
GHATATKCAT---
 A C G T A C G T A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

PH0148.1_Pou3f3/Jaspar

Match Rank:2
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----TATGCATTAC---
AAAATATGCATAATAAA
 A C G T A C G T A C G T A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C A C G T A C G T A C G T
G C T A G C T A C T A G C G T A G A C T G C T A G A C T C A T G G T A C C T G A C G A T C G T A G C T A C A G T C T G A C G T A C G T A

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:3
Score:0.71
Offset:-3
Orientation:reverse strand
Alignment:---TATGCATTAC
GAATATTCAT---
 A C G T A C G T A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

Hoxa10(Homeobox)/ChickenMSG-Hoxa10.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:TATGCATTAC-
-TTTCATTRCC
 G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C A C G T
A C G T G A C T A G C T G A C T A T G C G C T A A C G T A C G T C T G A A T G C G A T C

POU5F1/MA1115.1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TATGCATTAC
NATTTGCATNN-
 A C G T A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C
G T C A C G T A C G A T G A C T C G A T T C A G G A T C C T G A A G C T C G T A G C A T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-TATGCATTAC-
AGATGCAATCCC
 A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C A C G T
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:TATGCATTAC-
---YCATTAMC
 G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C A C G T
A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C

OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:8
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TATGCATTAC----
WYATGCATWATGCAT
 A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C A C G T A C G T A C G T A C G T
C G T A A G C T C G T A A C G T A C T G G T A C C G T A A C G T C G A T C G T A A C G T A C T G A G T C C G T A C G A T

CUX2/MA0755.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TATGCATTAC
TTATCGATTA-
 A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C
C G A T C G A T C G T A G C A T G A T C T C A G T C G A G A C T G A C T C G T A A C G T

Pou5f1::Sox2/MA0142.1/Jaspar

Match Rank:10
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TATGCATTAC----
ATTTGCATAACAAAG
 A C G T G C A T G T C A C G A T A T C G G T A C C G T A C G A T A G C T C T G A A T G C A C G T A C G T A C G T A C G T
G T C A G A C T G A C T G C A T T C A G T G A C G C T A C G A T C T G A G C T A A T G C G T C A T C G A C G T A T C A G