Information for 18-TTGTGCACGA (Motif 27)

A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A
Reverse Opposite:
A C G T A G T C A C T G A C G T A C T G A G T C C G T A G T A C C G T A C G T A
p-value:1e-7
log p-value:-1.624e+01
Information Content per bp:1.965
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif3.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.5 +/- 33.5bp
Average Position of motif in Background106.7 +/- 68.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0044.1_Mtf1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---TTGTGCACGA---
NNTTTGCACACGGCCC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T
C G A T G A C T C A G T A C G T G A C T A C T G G A T C C T G A A G T C G C T A G A T C A C T G C T A G G A T C T A G C G T A C

PB0104.1_Zscan4_1/Jaspar

Match Rank:2
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---TTGTGCACGA----
TACATGTGCACATAAAA
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T A C G T
C A G T G T C A T G A C C T G A C G A T T C A G A G C T C T A G A G T C C T G A A G T C G C T A A G C T G C T A G C T A C G T A G T C A

PB0026.1_Gm397_1/Jaspar

Match Rank:3
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGCACGA---
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G

CEBPA/MA0102.3/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--TTGTGCACGA
NATTGTGCAAT-
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A
C A G T T C G A A C G T A C G T C T A G A C G T A C T G G T A C C G T A C G T A A G C T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGCACGA-
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTGTGCACGA--
NNNNTTGGGCACNNCN
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T
A G T C G A T C C A G T G C A T G C A T C A G T A C T G A C T G A C T G A G T C C G T A G A T C G T C A G T A C T A G C G T A C

PB0168.1_Sox14_2/Jaspar

Match Rank:7
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------TTGTGCACGA
NNNCCATTGTGTNAN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T

HIF1A/MA1106.1/Jaspar

Match Rank:8
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:TTGTGCACGA--
--NNGCACGTNC
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T
A C G T A C G T T A C G T A C G C A T G A G T C T C G A A G T C C T A G G A C T T C G A A T G C

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:9
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGTGCACGA--
----GCACGTAY
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

ARNT::HIF1A/MA0259.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:TTGTGCACGA--
----GCACGTNC
 A C G T A C G T A C T G A C G T A C T G A G T C C G T A A G T C A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A G T C C G T A A G T C C T A G A G C T T G A C A T G C