Information for 25-ACACASWCWCNM (Motif 32)

C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
Reverse Opposite:
A C G T A C G T A C T G G C A T A T C G C G A T T A G C G C A T A T C G G C A T T C A G G C A T
p-value:1e0
log p-value:-2.105e+00
Information Content per bp:1.456
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif3.84%
Number of Background Sequences with motif1439.0
Percentage of Background Sequences with motif2.96%
Average Position of motif in Targets93.4 +/- 55.5bp
Average Position of motif in Background100.9 +/- 50.8bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACACASWCWCNM
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACACASWCWCNM
-CACAGN-----
 C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ACACASWCWCNM
--BCAGACWA--
 C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ACACASWCWCNM
--TCAGTCTT--
 C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T

KLF4/MA0039.3/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACACASWCWCNM
CCACACCCTGC-
 C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
T G A C T G A C T C G A G T A C C T G A A G T C T G A C G A T C G C A T A T C G G A T C A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:ACACASWCWCNM
--CCAGACRSVB
 C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

KLF9/MA1107.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ACACASWCWCNM
GGCCACACCCACC-
 A C G T A C G T C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
T C A G T A C G T G A C A T G C T G C A A T G C C T G A A T G C T G A C G A T C G T C A A G T C G A T C A C G T

ZNF768(Zf)/Rajj-ZNF768-ChIP-Seq(GSE111879)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ACACASWCWCNM
RHHCAGAGAGGB
 C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
T C A G G T C A G C T A A G T C C G T A A T C G T C G A T C A G C G T A A C T G A C T G A C T G

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--ACACASWCWCNM
GGACACACCCCC--
 A C G T A C G T C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:ACACASWCWCNM
--CCAGACAG--
 C G T A A G T C C G T A T A G C C G T A A T C G G C T A T A G C C G T A T G A C T G C A T G C A
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T