Information for 7-TTGCAACGAGCA (Motif 5)

A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A
Reverse Opposite:
A C G T A C T G A T G C A C G T A T G C T A C G A G C T A C G T A C T G A T G C G C T A C T G A
p-value:1e-12
log p-value:-2.987e+01
Information Content per bp:1.762
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.40%
Number of Background Sequences with motif73.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets92.4 +/- 51.4bp
Average Position of motif in Background100.7 +/- 61.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:1
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TTGCAACGAGCA
CCGCATAGCAACGGA--
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A A C G T A C G T

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----TTGCAACGAGCA
TACCATAGCAACGGT--
 A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A
A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T A C G T A C G T

PB0054.1_Rfx3_1/Jaspar

Match Rank:3
Score:0.58
Offset:-9
Orientation:forward strand
Alignment:---------TTGCAACGAGCA--
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0155.1_Osr2_2/Jaspar

Match Rank:4
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTGCAACGAGCA---
NNTGTAGGTAGCANNT
 A C G T A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A A C G T A C G T A C G T
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:5
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----TTGCAACGAGCA
NATGTTGCAA------
 A C G T A C G T A C G T A C G T A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:TTGCAACGAGCA-------
--NNNNTGAGCACTGTNNG
 A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C T A G A C T C G T A T C A G A C G T A C T G C T G A A C T G A G T C C G T A G T A C A G C T C A T G A G C T C A G T G T A C T C A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---TTGCAACGAGCA
SCCTAGCAACAG---
 A C G T A C G T A C G T A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T A C G T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----TTGCAACGAGCA
GGGATTGCATNN----
 A C G T A C G T A C G T A C G T A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T A C G T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:9
Score:0.52
Offset:7
Orientation:forward strand
Alignment:TTGCAACGAGCA
-------CAGCC
 A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:10
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TTGCAACGAGCA--
TGGCACCATGCCAA
 A G C T C G A T A T C G G T A C C G T A T C G A A T G C A T C G C G T A T A C G G T A C C G T A A C G T A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A