Information for 8-GTTTTAAAATGT (Motif 7)

A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
Reverse Opposite:
C G T A A G T C C T G A A C G T A C G T A G C T A C G T C G T A C G T A C G T A C G T A A G T C
p-value:1e-12
log p-value:-2.859e+01
Information Content per bp:1.949
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.96%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets98.2 +/- 21.2bp
Average Position of motif in Background50.9 +/- 24.5bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GTTTTAAAATGT
CGGTTTCAAA----
 A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GTTTTAAAATGT
-ATTTGAATT--
 A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
A C G T C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTTTTAAAATGT
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GTTTTAAAATGT--
NCGTATTATAATCNTA
 A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T A C G T A C G T
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTTTTAAAATGT-
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

PH0047.1_Hoxa11/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GTTTTAAAATGT
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTTTTAAAATGT
TAAGGTAATAAAATTA
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
C G A T C T G A T G C A C T A G T C A G G A C T G T C A C T G A C G A T G C T A C G T A G C T A G C T A A G C T C A G T G C T A

PH0066.1_Hoxc11/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GTTTTAAAATGT
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G

HOXC12/MA0906.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GTTTTAAAATGT
GGTCGTAAAAA--
 A C G T A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A A C G T A C G T

HSF2/MA0770.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:GTTTTAAAATGT--
-TTCTAGAACGTTC
 A C T G A C G T A C G T A C G T A C G T C G T A C T G A C G T A C G T A A G C T A C T G A C G T A C G T A C G T
A C G T C G A T C A G T T G A C A G C T T C G A C T A G G T C A C G T A A G T C C T A G C G A T G A C T A G T C