Information for 9-TGCAATCTGTTC (Motif 8)

A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
Reverse Opposite:
A C T G G T C A T C G A G T A C C G T A A C T G C G T A A G C T A C G T C A T G A G T C C G T A
p-value:1e-12
log p-value:-2.840e+01
Information Content per bp:1.794
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif66.5
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets101.7 +/- 44.3bp
Average Position of motif in Background97.3 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SIX2/MA1119.1/Jaspar

Match Rank:1
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---TGCAATCTGTTC-
AACTGAAACCTGATAC
 A C G T A C G T A C G T A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C A C G T
G C T A G C T A T G A C C G A T C A T G G C T A G T C A C T G A G A T C G T A C G C A T C T A G C G T A A C G T G T C A G A T C

NEUROD1/MA1109.1/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCAATCTGTTC
NNNCCATCTGTNN
 A C G T A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
A T G C A G C T T C A G T G A C G T A C C G T A A C G T T G A C G C A T A C T G A G C T A G T C G T A C

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:TGCAATCTGTTC
-GCCATCTGTT-
 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
A C G T T C A G T G A C G T A C C G T A A C G T T G A C A C G T T C A G A G C T G A C T A C G T

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:4
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCAATCTGTTC
-ACCATCTGTT-
 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
A C G T T C G A T G A C G T A C C G T A C A G T T G A C A C G T A C T G A G C T A G C T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:TGCAATCTGTTC
--AAATCACTGC
 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:6
Score:0.62
Offset:1
Orientation:forward strand
Alignment:TGCAATCTGTTC
-RCCATMTGTT-
 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:7
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---TGCAATCTGTTC
AGATGCAATCCC---
 A C G T A C G T A C G T A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T A C G T A C G T

Six4(Homeobox)/MCF7-SIX4-ChIP-Seq(Encode)/Homer

Match Rank:8
Score:0.59
Offset:0
Orientation:forward strand
Alignment:TGCAATCTGTTC---
TGWAAYCTGABACCB
 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C A C G T A C G T A C G T
C A G T A C T G C G T A G T C A C G T A A G C T G A T C A G C T A C T G C G T A A G T C G T C A A G T C A G T C A T C G

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:TGCAATCTGTTC----
------CTGTTCCTGG
 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:forward strand
Alignment:TGCAATCTGTTC
-----GCTGTG-
 A C G T C T A G G T A C C G T A C T G A C G A T A G T C C G A T A C T G A G C T C A G T T G A C
A C G T A C G T A C G T A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T