Information for 12-GCTTRCGT (Motif 28)

T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T
Reverse Opposite:
C G T A A G T C A C T G G A T C C G T A T G C A T A C G A G T C
p-value:1e-5
log p-value:-1.198e+01
Information Content per bp:1.714
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif641.1
Percentage of Background Sequences with motif1.33%
Average Position of motif in Targets79.9 +/- 56.0bp
Average Position of motif in Background97.2 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.26
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GMEB2/MA0862.1/Jaspar

Match Rank:1
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:GCTTRCGT--
--TTACGTAA
 T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A A T G C A C T G A G C T G T C A T G C A

Gmeb1/MA0615.1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCTTRCGT-------
GAGTGTACGTAAGATGG
 A C G T A C G T T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

PB0027.1_Gmeb1_1/Jaspar

Match Rank:3
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GCTTRCGT-------
GAGTGTACGTAAGATGG
 A C G T A C G T T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A T C G G T C A A C T G A C G T C A G T C A G T T C G A A G T C C T A G A G C T G T C A G T A C T A C G C G T A A G C T T C A G A T C G

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:GCTTRCGT----
--TTGCGTGCVA
 T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T A C T G A G T C T C A G C G A T C A T G G T A C T A G C C G T A

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTTRCGT-
---TGCGTG
 T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T
A C G T A C G T A C G T G A C T A C T G A G T C A C T G A C G T A C T G

HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer

Match Rank:6
Score:0.61
Offset:3
Orientation:forward strand
Alignment:GCTTRCGT---
---TACGTGCV
 T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T G A G A T C A T C G G A C T T C A G G T A C T A G C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCTTRCGT--
GGGTACGTGC
 T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T
C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

Atf1/MA0604.1/Jaspar

Match Rank:8
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GCTTRCGT---
---TACGTCAT
 T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T A C G T
A C G T A C G T A C G T A G C T C T G A A G T C A C T G A C G T T G A C C G T A A G C T

NRF1/MA0506.1/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCTTRCGT-
GCGCCTGCGCA
 A C G T A C G T T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GCTTRCGT----
CNNNGCTACTGTANNN
 A C G T A C G T A C G T A C G T T C A G A T G C A C G T C G A T C T A G T G A C A C T G G C A T A C G T A C G T A C G T A C G T
G A T C C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C A T G A C G T C G T A A G T C C G T A C G A T