Information for 13-CTGAACGACTAA (Motif 15)

A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A
Reverse Opposite:
C G A T A C G T C G T A A C T G A C G T A T G C A C T G A C G T A C G T A G T C C G T A A C T G
p-value:1e-16
log p-value:-3.795e+01
Information Content per bp:1.943
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets104.6 +/- 39.2bp
Average Position of motif in Background15.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CTGAACGACTAA-----
CTTAACCACTTAAGGAT
 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

VENTX/MA0724.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:forward strand
Alignment:CTGAACGACTAA
---ACCGATTAG
 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A
A C G T A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTGAACGACTAA-----
CATAACCACTTAACAAC
 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer

Match Rank:4
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CTGAACGACTAA-
-TTAATNATTAAC
 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T
A C G T A C G T G A C T T C G A G T C A G C A T T A G C C G T A C A G T A G C T C G T A T G C A G A T C

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.54
Offset:3
Orientation:forward strand
Alignment:CTGAACGACTAA-
---AAGCACTTAA
 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PB0032.1_IRC900814_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:CTGAACGACTAA----
ATTTACGACAAATAGC
 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T A C G T A C G T A C G T
C G T A C G A T G A C T A G C T G C T A A G T C A C T G C T G A T G A C C T G A C G T A G C T A G C A T C G T A C T A G A G T C

Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer

Match Rank:7
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CTGAACGACTAA
GGTTAAACATTAA
 A C G T A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A
C T A G C T A G G C A T C G A T C T G A G T C A G C T A A T G C C G T A C A G T G A C T C G T A T G C A

PB0028.1_Hbp1_1/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---CTGAACGACTAA-
ACTATGAATGAATGAT
 A C G T A C G T A C G T A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGAACGACTAA--
TTGACCTANTTATN
 A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T A C G T
A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

HNF1A/MA0046.2/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTGAACGACTAA--
AGTTAATGATTAACT
 A C G T A G T C A C G T A C T G C G T A C G T A G T A C A T C G C G T A A G T C A C G T C G T A C G T A A C G T A C G T
C T G A C T A G A G C T G C A T C T G A G T C A G C A T T A C G C G T A C A G T G A C T C G T A T C G A G T A C G C A T