Information for 23-TCTTACAACGAG (Motif 27)

A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G
Reverse Opposite:
A G T C A C G T A G T C A C T G A C G T A C G T A C T G A C G T C G T A C G T A A C T G C G T A
p-value:1e-7
log p-value:-1.624e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets112.5 +/- 41.6bp
Average Position of motif in Background171.9 +/- 22.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0120.1_Foxj1_2/Jaspar

Match Rank:1
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TCTTACAACGAG--
ATGTCACAACAACAC
 A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T
C G T A A G C T T C A G A C G T T A G C T C G A A G T C C T G A G T C A T G A C C G T A C T G A A T G C T C G A G T A C

HOXD11/MA0908.1/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TCTTACAACGAG
NTTTTACGAC---
 A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G
C G A T C G A T C G A T C G A T C G A T C G T A A G T C C T A G C G T A A G T C A C G T A C G T A C G T

HOXC12/MA0906.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTTACAACGAG
NTTTTACGACC--
 A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G
C G A T C A G T C G A T G C A T C G A T T C G A A G T C C A T G C T G A A G T C G A T C A C G T A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:4
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCTTACAACGAG-
NNNATTTTACGACNNTN
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G A C G T
G T C A C G T A C T A G C T G A C G A T C G A T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T A G

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:TCTTACAACGAG
-VRRACAAWGG-
 A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G
A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Rhox11/MA0629.1/Jaspar

Match Rank:6
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCTTACAACGAG--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0157.1_Rhox11_1/Jaspar

Match Rank:7
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---TCTTACAACGAG--
TCNNTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T
C G A T A G T C A T C G G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G A G T C C T A G A C G T G T A C A C G T G C A T

PH0158.1_Rhox11_2/Jaspar

Match Rank:8
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---TCTTACAACGAG--
TCNCTTTACAGCGNNNT
 A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T
C G A T A G T C A T G C G A T C C G A T C G A T C G A T C G T A G A T C G C T A A T C G G A T C C T A G C A G T G T A C A G T C C G A T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:9
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:TCTTACAACGAG----
----ACAAAGGNBCCT
 A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

PH0076.1_Hoxd11/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:reverse strand
Alignment:----TCTTACAACGAG-
ANNATTTTACGACNTNA
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C G T C G T A A G T C C G T A C G T A A G T C A C T G C G T A A C T G A C G T
G T C A C T A G C T A G C G T A C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C A G T C G A C T C G A T C T G A