Information for 24-ACTGAAATTT (Motif 29)

C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A A C G T A C G T A C G T A G T C C G T A A C T G A C G T
p-value:1e-6
log p-value:-1.510e+01
Information Content per bp:1.530
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.15%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets89.0 +/- 45.0bp
Average Position of motif in Background79.8 +/- 40.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0169.1_Sox15_2/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---ACTGAAATTT--
TTGAATGAAATTCGA
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C A G C T G A G T C A A G C T A C T G C G T A G T C A C T G A C A G T G A C T G A T C T A C G T C G A

HOXA5/MA0158.1/Jaspar

Match Rank:2
Score:0.66
Offset:1
Orientation:forward strand
Alignment:ACTGAAATTT
-CACTAATT-
 C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
A C G T G T A C C T G A A T G C C G A T C G T A C T G A A C G T A C G T A C G T

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:reverse strand
Alignment:---ACTGAAATTT--
AACACTGAAATTGTT
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T
T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

Hoxd12(Homeobox)/ChickenMSG-Hoxd12.Flag-ChIP-Seq(GSE86088)/Homer

Match Rank:4
Score:0.65
Offset:-4
Orientation:forward strand
Alignment:----ACTGAAATTT
HDGYAATGAAAN--
 A C G T A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G T C A C T G A T C A G G A T C T G C A T G C A A C G T T C A G C G T A C G T A C G T A G C T A A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.64
Offset:0
Orientation:forward strand
Alignment:ACTGAAATTT
ACTGAAACCA
 C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

SOX4/MA0867.1/Jaspar

Match Rank:6
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTGAAATTT---
AACACTGCAATTGTTC
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T
C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:7
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ACTGAAATTT
GAAAGTGAAAGT-
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTGAAATTT
GAAACTGAAACT-
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T A C G T

TEAD3(TEA)/HepG2-TEAD3-ChIP-Seq(Encode)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:ACTGAAATTT-
-CTGGAATGYA
 C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G T A C G A C T A C T G A C T G C G T A C G T A A C G T A C T G G A T C T C G A

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---ACTGAAATTT
GAAAMTGAAACT-
 A C G T A C G T A C G T C G T A A G T C A C G T A C T G C G T A C G T A C G T A A C G T A C G T A C G T
C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T A C G T