Information for 1-NNMCAGCTGB (Motif 3)

G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
Reverse Opposite:
T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G A C G T C T G A
p-value:1e-38
log p-value:-8.857e+01
Information Content per bp:1.676
Number of Target Sequences with motif920.0
Percentage of Target Sequences with motif19.99%
Number of Background Sequences with motif5849.7
Percentage of Background Sequences with motif13.08%
Average Position of motif in Targets99.6 +/- 54.3bp
Average Position of motif in Background101.9 +/- 59.9bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BHLHA15(bHLH)/NIH3T3-BHLHB8.HA-ChIP-Seq(GSE119782)/Homer

Match Rank:1
Score:0.98
Offset:0
Orientation:forward strand
Alignment:NNMCAGCTGB
NAMCAGCTGK
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
C T A G T C G A T G A C A G T C C G T A A C T G G T A C A C G T A C T G A C T G

Twist2(bHLH)/Myoblast-Twist2.Ty1-ChIP-Seq(GSE127998)/Homer

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:NNMCAGCTGB
DRVCAGCTGK
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
C A T G C T G A T G C A A G T C C G T A A C T G T G A C A C G T A C T G A C T G

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:3
Score:0.96
Offset:-1
Orientation:forward strand
Alignment:-NNMCAGCTGB-
NNVVCAGCTGBN
 A C G T G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:4
Score:0.96
Offset:0
Orientation:reverse strand
Alignment:NNMCAGCTGB
NAACAGCTGT
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
T C A G T G C A T C G A A G T C C G T A A T C G T A G C A C G T A C T G A G C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NNMCAGCTGB
NNACAGCTGC
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer

Match Rank:6
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NNMCAGCTGB
NAACAGCTGG
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
C G A T T G C A T G C A G A T C C G T A A C T G T G A C G A C T C A T G A C T G

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:7
Score:0.95
Offset:0
Orientation:forward strand
Alignment:NNMCAGCTGB
NAHCAGCTGD
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
G T C A T G C A G C T A A G T C C G T A A C T G T G A C G C A T T C A G C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NNMCAGCTGB
CAGCAGCTGN
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:NNMCAGCTGB---
-GCCAGCTGBTNB
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G A C G T A C G T A C G T
A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer

Match Rank:10
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NNMCAGCTGB--
--VCAGCTGBNN
 G A C T T G C A T G A C G T A C C G T A A C T G G T A C A C G T A C T G A C T G A C G T A C G T
A C G T A C G T T G A C A T G C C G T A A T C G A T G C C A G T C A T G A C T G A G T C G T A C