Information for 24-CTCTGTCCATGG (Motif 31)

A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G
Reverse Opposite:
A G T C G T A C C G T A A C G T A C T G A C T G C G T A A G T C C G T A C T A G C G T A A C T G
p-value:1e-3
log p-value:-8.449e+00
Information Content per bp:1.944
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.13%
Number of Background Sequences with motif8.0
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets101.4 +/- 54.0bp
Average Position of motif in Background110.9 +/- 54.3bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTCCATGG-------
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CTCTGTCCATGG
--CTGTTCCTGG
 A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--CTCTGTCCATGG------
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:CTCTGTCCATGG
--CTGACCTTTG
 A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:5
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTCCATGG
YCTTTGTTCC---
 A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CTCTGTCCATGG
-BNTGDCCTTG-
 A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G
A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCTGTCCATGG-
---TGACCTTGAV
 A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTCTGTCCATGG-
---TGACCTTGAN
 A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G A C G T
A C G T A C G T A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CTCTGTCCATGG-
-TYTGACCASWRG
 A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G A C G T
A C G T G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G

PB0166.1_Sox12_2/Jaspar

Match Rank:10
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----CTCTGTCCATGG
ANTCCTTTGTCTNNNN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C A C G T A C T G A C G T A G T C A G T C G T C A A C G T A C T G A C T G
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T