Information for 4-CCTGCCAGAA (Motif 4)

T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
Reverse Opposite:
A C G T C G A T A G T C A G C T C T A G T A C G T G A C C G T A A C T G A T C G
p-value:1e-26
log p-value:-6.123e+01
Information Content per bp:1.655
Number of Target Sequences with motif690.0
Percentage of Target Sequences with motif14.99%
Number of Background Sequences with motif4439.5
Percentage of Background Sequences with motif9.93%
Average Position of motif in Targets102.9 +/- 55.5bp
Average Position of motif in Background100.0 +/- 58.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CCTGCCAGAA-
-ATGCCAGACN
 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A A C G T
A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:2
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCTGCCAGAA
-TTGCCAAG-
 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.69
Offset:1
Orientation:forward strand
Alignment:CCTGCCAGAA
-CTGCCCGCA
 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
A C G T A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A

NFIX/MA0671.1/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:CCTGCCAGAA
CGTGCCAAG-
 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:5
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CCTGCCAGAA
--TGCCAGCB
 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
A C G T A C G T G A C T C T A G A T G C A G T C G T C A T A C G A T G C A T C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:6
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------CCTGCCAGAA
TGGCAGNCTGCCAG--
 A C G T A C G T A C G T A C G T A C G T A C G T T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:7
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCTGCCAGAA
GGTGCCAAGT
 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

MEIS2/MA0774.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCTGCCAGAA
GCTGTCAA--
 T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T

E2F7/MA0758.1/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----CCTGCCAGAA
TTTTCCCGCCAAAA
 A C G T A C G T A C G T A C G T T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
C G A T C G A T A G C T A G C T A T G C A T G C A G T C T C A G A G T C A T G C C G T A C G T A G C T A C G T A

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:10
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-CCTGCCAGAA
VGCTGWCAVB-
 A C G T T A G C T G A C G C A T A C T G A T G C G A T C T C G A T C A G G C T A T G C A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T