Information for 5-TTCCGGCAAA (Motif 6)

G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A
Reverse Opposite:
G A C T A C G T A C G T A T C G A T G C G T A C C T A G T C A G T G C A C T G A
p-value:1e-25
log p-value:-5.933e+01
Information Content per bp:1.533
Number of Target Sequences with motif1162.0
Percentage of Target Sequences with motif25.25%
Number of Background Sequences with motif8452.0
Percentage of Background Sequences with motif18.90%
Average Position of motif in Targets100.2 +/- 54.7bp
Average Position of motif in Background99.9 +/- 61.5bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TTCCGGCAAA
CTTCCNGGAA-
 A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T

STAT1/MA0137.3/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:forward strand
Alignment:-TTCCGGCAAA
TTTCCAGGAAA
 A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A
A C G T A G C T A C G T T G A C G A T C C T G A C T A G C A T G C T G A G T C A C T G A

PB0075.1_Sp100_1/Jaspar

Match Rank:3
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TTCCGGCAAA-
ATTTTCCGNNAAAT
 A C G T A C G T A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A A C G T
G T C A C G A T C G A T G C A T C A G T G T A C A T G C A T C G C A G T C T G A C G T A G C T A G C T A A G C T

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:4
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TTCCGGCAAA-
NATTTCCNGGAAAT
 A C G T A C G T A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A A C G T
A T G C C T G A G A C T A C G T A C G T G T A C G A T C C G A T C T A G C A T G C G T A C G T A C T G A G A C T

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---TTCCGGCAAA
HACTTCCGGY---
 A C G T A C G T A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A
G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T A C G T A C G T A C G T

Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer

Match Rank:6
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--TTCCGGCAAA--
NCTTCCNGGAAGNN
 A C G T A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A A C G T A C G T
T C A G A G T C G A C T A C G T G T A C A G T C C G A T C T A G C A T G G T C A C T G A T C A G A G C T T A C G

STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer

Match Rank:7
Score:0.76
Offset:-1
Orientation:reverse strand
Alignment:-TTCCGGCAAA-
TTTCCNGGAAAN
 A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A A C G T
A G C T A C G T A C G T G T A C G A T C G C A T C T A G C A T G G T C A C G T A T C G A A G T C

STAT3/MA0144.2/Jaspar

Match Rank:8
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TTCCGGCAAA
CTTCTGGGAAA
 A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A
A G T C C G A T A C G T G A T C G A C T C A T G C T A G C T A G C G T A C G T A C T G A

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---TTCCGGCAAA
NRYTTCCGGY---
 A C G T A C G T A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A
G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T A C G T A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:10
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TTCCGGCAAA---
TTTCCAGGAAATGG
 A C G T G A C T A C G T A G T C A G T C C A T G T A C G T A G C T G C A T G C A C T G A A C G T A C G T A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G