Information for 13-GAAATCCTCTCC (Motif 11)

T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
Reverse Opposite:
C T A G A C T G C G T A T A C G C G T A A C T G A C T G G T C A C G A T A C G T A C G T A G T C
p-value:1e-12
log p-value:-2.867e+01
Information Content per bp:1.786
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif1.24%
Number of Background Sequences with motif51.8
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets88.9 +/- 66.4bp
Average Position of motif in Background111.7 +/- 54.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GAAATCCTCTCC
GGGAAATCCCCN--
 A C G T A C G T T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GAAATCCTCTCC
GGAAATCCCC---
 A C G T T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:3
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAATCCTCTCC
CTAATCCTCTT-
 T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
G A T C C G A T C T G A C G T A A C G T A G T C G A T C A G C T G A T C G A C T A G C T A C G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GAAATCCTCTCC
SSAATCCACANN
 T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

RELB/MA1117.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GAAATCCTCTCC
GAATTCCCCGG-
 T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
C T A G C T G A C G T A C G A T G A C T G A T C G T A C G T A C T A G C C A T G T A C G A C G T

PH0037.1_Hdx/Jaspar

Match Rank:6
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----GAAATCCTCTCC
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T A C G T A C G T T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

RELA/MA0107.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GAAATCCTCTCC
GGAAATTCCC---
 A C G T T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAATCCTCTCC
GGAAATTCCC---
 A C G T T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAAATCCTCTCC
GGAAANCCCC---
 A C G T T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GAAATCCTCTCC
TCCAATCCACA--
 A C G T T C A G C G T A C G T A C G T A C A G T G T A C A G T C G C A T A G T C G C A T A G T C A G T C
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T