Information for 13-CGCACATT (Motif 17)

T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T
Reverse Opposite:
C T G A T C G A A C G T A C T G C G A T C A T G T G A C A C T G
p-value:1e-8
log p-value:-1.883e+01
Information Content per bp:1.805
Number of Target Sequences with motif96.0
Percentage of Target Sequences with motif7.02%
Number of Background Sequences with motif1803.6
Percentage of Background Sequences with motif3.74%
Average Position of motif in Targets99.1 +/- 58.6bp
Average Position of motif in Background99.5 +/- 59.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TEAD2/MA1121.1/Jaspar

Match Rank:1
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CGCACATT------
-TCACATTCCAGCC
 T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T G A C T G A T C T C G A T G A C C T G A A G C T C G A T A G T C G A T C G C T A C A T G A T G C T A G C

TEAD4/MA0809.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGCACATT----
--CACATTCCAT
 T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G T A C C T G A T G A C C G T A C G A T C G A T A G T C G A T C C G T A G A C T

TEAD1/MA0090.2/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CGCACATT----
--CACATTCCAT
 T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T A C G T A C G T
A C G T A C G T G A T C T C G A T G A C G T C A A G C T G C A T G T A C A G T C C G T A G A C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CGCACATT-----
CGAAGCACACAAAATA
 A C G T A C G T A C G T T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T A C G T A C G T A C G T
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

POU6F2/MA0793.1/Jaspar

Match Rank:5
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGCACATT--
AGCTCATTAT
 T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T
C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T

NOTO/MA0710.1/Jaspar

Match Rank:6
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCACATT---
-GCTAATTAGC
 T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T A C G T
A C G T T A C G G A T C G C A T G T C A C G T A A C G T C A G T C T G A T C A G A T G C

TEAD1(TEAD)/HepG2-TEAD1-ChIP-Seq(Encode)/Homer

Match Rank:7
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CGCACATT---
-CYRCATTCCA
 T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T A C G T
A C G T T G A C A G T C C T G A T G A C C G T A A C G T A C G T A G T C A G T C C G T A

HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer

Match Rank:8
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CGCACATT-
-GCACGTAY
 T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T
A C G T C A T G T A G C C T G A G A T C C T A G G A C T G T C A A G C T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:9
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCACATT
CCAGGAACAG-
 A C G T A C G T A C G T T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T
T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

PB0026.1_Gm397_1/Jaspar

Match Rank:10
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------CGCACATT--
NNGTATGTGCACATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C A C T G G T A C C G T A G T A C C G T A A G C T A G C T A C G T A C G T
C T G A G T A C C A T G C A G T T C G A C G A T T A C G A G C T C T A G A G T C C T G A A T G C G C T A G C A T G T A C C G A T C A T G