Information for 18-YSARKGAHTY (Motif 19)

A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T
Reverse Opposite:
T C G A T G C A C T G A C G A T T G A C G T A C G A C T A G C T A T G C T C G A
p-value:1e-6
log p-value:-1.499e+01
Information Content per bp:1.457
Number of Target Sequences with motif24.0
Percentage of Target Sequences with motif1.76%
Number of Background Sequences with motif245.6
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets80.5 +/- 48.1bp
Average Position of motif in Background100.5 +/- 54.9bp
Strand Bias (log2 ratio + to - strand density)1.7
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.66
Offset:-4
Orientation:forward strand
Alignment:----YSARKGAHTY--
ACTATGAATGAATGAT
 A C G T A C G T A C G T A C G T A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:YSARKGAHTY-
-CNGTGATTTN
 A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T A C G T
A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

ZNF24/MA1124.1/Jaspar

Match Rank:3
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---YSARKGAHTY
GAATGAATGAATG
 A C G T A C G T A C G T A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T
C T A G T C G A C T G A A G C T C T A G C T G A T C G A A G C T C T A G T C G A C T G A A G C T C T A G

MF0010.1_Homeobox_class/Jaspar

Match Rank:4
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:YSARKGAHTY
--AATTATT-
 A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T
A C G T A C G T G C T A G C T A G A C T G A C T C G T A G C A T C G A T A C G T

PH0037.1_Hdx/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-YSARKGAHTY------
TNNNATGATTTCNNCNN
 A C G T A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T C A T G T A G C C T A G C T G A C G A T A T C G G T C A G C A T G C A T A C G T G A T C C A T G G T A C T G A C G A C T G C A T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:6
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---YSARKGAHTY----
ACTCCAAGTACTTGGAA
 A C G T A C G T A C G T A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T A C G T A C G T A C G T A C G T
T C G A G T A C C G A T A T G C T A G C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A C T G T C A G T G C A G T C A

Pax2/MA0067.1/Jaspar

Match Rank:7
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:YSARKGAHTY
-NCGTGACN-
 A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T
A C G T T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T

JUNB/MA0490.1/Jaspar

Match Rank:8
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YSARKGAHTY--
-GGATGACTCAT
 A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T A C G T A C G T
A C G T C A T G C T A G T C G A A C G T A C T G C G T A A T G C A C G T G T A C C G T A A C G T

FOSL2/MA0478.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:YSARKGAHTY--
-GGATGACTCAT
 A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T A C G T A C G T
A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T

PH0116.1_Nkx2-9/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---YSARKGAHTY----
NATTTAAGTACTTNAAA
 A C G T A C G T A C G T A G C T T A C G T C G A C T G A C A T G A C T G G C T A G A C T A C G T A G C T A C G T A C G T A C G T A C G T
C T G A G C T A C G A T G C A T A G C T C T G A C T G A A T C G A G C T C T G A A T G C G A C T G A C T G C T A C G T A C T G A G C T A