Information for 2-CCACYAGGGGGC (Motif 2)

T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C
Reverse Opposite:
C A T G G T A C T G A C G T A C G A T C A G T C A G C T C T G A A T C G C G A T A T C G A C T G
p-value:1e-53
log p-value:-1.238e+02
Information Content per bp:1.746
Number of Target Sequences with motif81.0
Percentage of Target Sequences with motif5.93%
Number of Background Sequences with motif266.2
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets111.0 +/- 49.4bp
Average Position of motif in Background102.3 +/- 56.9bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.01
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-CCACYAGGGGGC-------
GCCASCAGGGGGCGCYVNNG
 A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---CCACYAGGGGGC----
TGGCCACCAGGGGGCGCTA
 A C G T A C G T A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.89
Offset:-3
Orientation:reverse strand
Alignment:---CCACYAGGGGGC-----
TGGCCACCAGGTGGCACTNT
 A C G T A C G T A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCFL/MA1102.1/Jaspar

Match Rank:4
Score:0.86
Offset:1
Orientation:forward strand
Alignment:CCACYAGGGGGC---
-CACCAGGGGGCACC
 T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T A C G T A C G T
A C G T T A G C T C G A T A G C A G T C T G C A T A C G T C A G A C T G T A C G A C T G G T A C T C G A A T G C A G T C

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CCACYAGGGGGC-
DCHCAGCAGGRGGCC
 A C G T A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCACYAGGGGGC
CACCCCCGGGGGGG
 A C G T A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C
A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CCACYAGGGGGC------
-NNNAAGGGGGCGGGNNN
 T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCACYAGGGGGC
CACAGCAGGGGG-
 A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C
T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCACYAGGGGGC-
NCNCAGCGGGGGGTC
 A C G T A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T
C A T G T G A C C T G A G A T C G T C A T C A G G A T C C T A G C A T G C A T G C A T G C A T G C A T G A G C T T G A C

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--CCACYAGGGGGC-
NCCCCCCCGGGGGGN
 A C G T A C G T T G A C A T G C G C T A T A G C G A C T T C G A C T A G C T A G C A T G A C T G C A T G G T A C A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G