Information for 20-CTCACACTCAGG (Motif 22)

A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A C T G C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C T G
p-value:1e-4
log p-value:-9.249e+00
Information Content per bp:1.975
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.22%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets91.4 +/- 52.2bp
Average Position of motif in Background115.3 +/- 36.1bp
Strand Bias (log2 ratio + to - strand density)3.0
Multiplicity (# of sites on avg that occur together)3.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

WT1(Zf)/Kidney-WT1-ChIP-Seq(GSE90016)/Homer

Match Rank:1
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-CTCACACTCAGG
MCTCCCMCRCAB-
 A C G T A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
G T A C G A T C C A G T A G T C A G T C A G T C T G C A G A T C C T G A A T G C G T C A A C G T A C G T

PBX3/MA1114.1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----CTCACACTCAGG-
NNNCCTGTCACTCANNN
 A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G A C G T
T A G C A G T C T A C G A T G C T G A C G A C T A T C G G A C T A T G C G T C A T G A C G C A T A G T C G C T A T G A C T G A C A T G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTCACACTCAGG
GSCTGTCACTCA--
 A C G T A C G T A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
C T A G A T G C A T G C C G A T A C T G G A C T A T G C G C T A T G A C A G C T T A G C G C T A A C G T A C G T

MGA/MA0801.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CTCACACTCAGG
-TCACACCT---
 A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
A C G T G A C T T G A C C T G A G A T C T C G A T A G C A G T C G A C T A C G T A C G T A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CTCACACTCAGG
CRCCCACGCA--
 A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CTCACACTCAGG
NCTGTCAATCAN-
 A C G T A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
T A G C T A G C G A C T C T A G A G C T A G T C G T C A T G C A A C G T A T G C G C T A T G C A A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CTCACACTCAGG
-AGCCACTCAAG
 A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CTCACACTCAGG
SCTGTCAVTCAV-
 A C G T A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A A C G T

PB0130.1_Gm397_2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CTCACACTCAGG
AGCGGCACACACGCAA-
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T

T/MA0009.2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CTCACACTCAGG-----
-TCACACCTAGGTGTGA
 A G T C A C G T A G T C C G T A A G T C G T C A A G T C A C G T A G T C C G T A A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G A C T T G A C C T G A A G T C T C G A G A T C T G A C G A C T C G T A A C T G C T A G A G C T C T A G G A C T A C T G C T G A