Information for 10-TTTTGGCA (Motif 8)

A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A
Reverse Opposite:
C G A T A C T G A T G C G A T C C G T A C T G A G T C A T G C A
p-value:1e-13
log p-value:-3.190e+01
Information Content per bp:1.797
Number of Target Sequences with motif187.0
Percentage of Target Sequences with motif13.68%
Number of Background Sequences with motif3680.7
Percentage of Background Sequences with motif7.64%
Average Position of motif in Targets90.4 +/- 53.6bp
Average Position of motif in Background100.0 +/- 62.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIA/MA0670.1/Jaspar

Match Rank:1
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCA--
NNTTGGCANN
 A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T A C G T
G C T A A G T C A C G T A C G T A C T G A C T G A G T C C G T A G T A C A G T C

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:TTTTGGCA--
-NTTGGCANN
 A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T A C G T
A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.82
Offset:1
Orientation:reverse strand
Alignment:TTTTGGCA-
-CTTGGCAA
 A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T
A C G T A T G C A G C T A C G T A C T G A T C G A G T C C G T A T C G A

NFIC/MA0161.2/Jaspar

Match Rank:4
Score:0.78
Offset:-1
Orientation:forward strand
Alignment:-TTTTGGCA--
TACTTGGCAGA
 A C G T A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T A C G T
G A C T G C T A T G A C A C G T G C A T T C A G C A T G G A T C C G T A A T C G C G T A

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.77
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCA-
GGTTGGCAT
 A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.71
Offset:-8
Orientation:forward strand
Alignment:--------TTTTGGCA
NNTGTTTATTTTGGCA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A
C G A T G A C T C G A T T C A G G A C T A C G T C A G T C T G A G A C T G A C T A G C T C G A T A C T G A T C G G T A C G C T A

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---TTTTGGCA----
ANATTTTTGCAANTN
 A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T A C G T A C G T A C G T
C G T A G A C T C G T A C G A T G C A T C G A T G C A T A G C T C T A G T A G C T G C A T G C A G C A T A G C T C A T G

HIC2/MA0738.1/Jaspar

Match Rank:8
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCA-
NGTGGGCAT
 A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:9
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:TTTTGGCA
VGCTGGCA
 A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A

PB0029.1_Hic1_1/Jaspar

Match Rank:10
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----TTTTGGCA----
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T A C G T A C G T G A C T C G A T C T A G A T C G G T A C C G T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T