Information for 17-TAWCCAAC (Motif 22)

A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C
Reverse Opposite:
A C T G A C G T A C G T A C T G A C T G C G A T A G C T C G T A
p-value:1e-7
log p-value:-1.655e+01
Information Content per bp:1.870
Number of Target Sequences with motif114.0
Percentage of Target Sequences with motif6.81%
Number of Background Sequences with motif1898.5
Percentage of Background Sequences with motif4.01%
Average Position of motif in Targets107.9 +/- 57.2bp
Average Position of motif in Background99.9 +/- 60.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL004.1_CCAAT-box/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TAWCCAAC--
ACTAGCCAATCA
 A C G T A C G T A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

PB0150.1_Mybl1_2/Jaspar

Match Rank:2
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TAWCCAAC-------
CGACCAACTGCCGTG
 A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

PB0158.1_Rfx3_2/Jaspar

Match Rank:3
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------TAWCCAAC-------
NNTNGNNGTAACCAAGNNNNAGN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T A G C G C A T A G C T A G C T A C T G A G C T A C T G C A T G G A C T G T C A G C T A T A G C A G T C C G T A C G T A T A C G A T C G T A C G C G A T T A G C T G C A C T A G A C G T

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:4
Score:0.63
Offset:-6
Orientation:reverse strand
Alignment:------TAWCCAAC---
NTNNCGTATCCAAGTNN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T A C G T
C G T A C G A T G C A T A T G C A T G C C T A G G A C T G T C A C G A T A G T C A G T C C T G A G T C A T A C G A G C T T G C A T A C G

MYB/MA0100.3/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TAWCCAAC----
--ACCAACTGTC
 A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T A C G T A C G T
A C G T A C G T G T C A A G T C A G T C C T G A G C T A A G T C A C G T T C A G G A C T G T A C

PB0133.1_Hic1_2/Jaspar

Match Rank:6
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----TAWCCAAC---
GGGTGTGCCCAAAAGG
 A C G T A C G T A C G T A C G T A C G T A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T A C G T
C A T G A T C G C A T G C A G T C T A G A C G T C T A G A G T C A G T C G T A C G T C A C G T A C G T A G T C A C T A G T A C G

HMBOX1/MA0895.1/Jaspar

Match Rank:7
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TAWCCAAC
GTTAACTAGN
 A C G T A C G T A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C
A T C G C A G T G C A T C G T A G C T A T A G C G A C T G C T A T C A G A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:TAWCCAAC--------
CGACCAACTGCCATGC
 A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

Foxj2/MA0614.1/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-TAWCCAAC
GTAAACAA-
 A C G T A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C
C T A G G C A T G T C A C G T A C G T A A G T C C G T A C G T A A C G T

Bcl11a(Zf)/HSPC-BCL11A-ChIP-Seq(GSE104676)/Homer

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TAWCCAAC--
TYTGACCASWRG
 A C G T A C G T A C G T C T G A C G T A A G T C A G T C C G T A C G T A T G A C A C G T A C G T
G A C T A G T C C G A T A C T G C T G A T G A C G T A C C G T A A T C G G C A T C T G A C T A G