Information for 3-AAACCACAKN (Motif 3)

G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
Reverse Opposite:
T G A C T G C A C G A T A C T G C G A T A C T G T C A G G A C T G A C T C G A T
p-value:1e-45
log p-value:-1.057e+02
Information Content per bp:1.643
Number of Target Sequences with motif496.0
Percentage of Target Sequences with motif29.61%
Number of Background Sequences with motif7415.3
Percentage of Background Sequences with motif15.68%
Average Position of motif in Targets97.5 +/- 54.6bp
Average Position of motif in Background99.7 +/- 62.1bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.22
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAKN
NAAACCACAG-
 A C G T G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:2
Score:0.94
Offset:-1
Orientation:forward strand
Alignment:-AAACCACAKN-
NWAACCACADNN
 A C G T G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G A C G T
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:AAACCACAKN-
AAACCACAGAN
 G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.94
Offset:0
Orientation:forward strand
Alignment:AAACCACAKN
AAACCACANN
 G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:reverse strand
Alignment:AAACCACAKN
AAACCACAGC
 G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:AAACCACAKN
AAACCGCAAA
 G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
G C T A T C G A T G C A G T A C A T G C T C A G A T G C T G C A T C G A G C T A

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:forward strand
Alignment:AAACCACAKN
AAACCGCAA-
 G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:forward strand
Alignment:AAACCACAKN-
AAATCACAGCA
 G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---AAACCACAKN
TCCAATCCACA--
 A C G T A C G T A C G T G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.69
Offset:1
Orientation:forward strand
Alignment:AAACCACAKN
-ATCCAC---
 G C T A C T G A C T G A A G T C G T A C C G T A A G T C C G T A A C G T A C T G
A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T