Information for 4-NNNCAGCTGN (Motif 4)

A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C
Reverse Opposite:
C T A G A T G C C G T A C A T G G A T C C A G T T A C G A G C T T A G C T G C A
p-value:1e-39
log p-value:-9.004e+01
Information Content per bp:1.464
Number of Target Sequences with motif371.0
Percentage of Target Sequences with motif22.15%
Number of Background Sequences with motif5161.0
Percentage of Background Sequences with motif10.91%
Average Position of motif in Targets101.5 +/- 54.0bp
Average Position of motif in Background100.1 +/- 68.7bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:1
Score:0.95
Offset:2
Orientation:reverse strand
Alignment:NNNCAGCTGN--
--HCAGCTGDTN
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T A C G T
A C G T A C G T G T C A A G T C C G T A A C T G G T A C G C A T C T A G C G A T A C G T C A G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.94
Offset:2
Orientation:forward strand
Alignment:NNNCAGCTGN--
--NCAGCTGCTG
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T A C G T
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:3
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NNNCAGCTGN---
-AGCAGCTGCTNN
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T A C G T A C G T
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:NNNCAGCTGN--
--GCAGCTGTNN
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T A C G T
A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Myog/MA0500.1/Jaspar

Match Rank:5
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NNNCAGCTGN--
-GACAGCTGCAG
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T A C G T
A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G

MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:6
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NNNCAGCTGN
-AACAGCTG-
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G A C G T

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:7
Score:0.92
Offset:-1
Orientation:forward strand
Alignment:-NNNCAGCTGN-
NNVVCAGCTGBN
 A C G T A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T
C T A G A G T C T A C G T A C G T G A C C G T A A C T G T A G C G C A T C A T G A T G C A G C T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NNNCAGCTGN--
-AACAGCTGCAG
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T A C G T
A C G T T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:9
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:NNNCAGCTGN-
---CAGCTGNT
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C A C G T
A C G T A C G T A C G T G T A C C G T A A C T G T G A C C G A T A C T G A G T C G A C T

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:10
Score:0.91
Offset:0
Orientation:forward strand
Alignment:NNNCAGCTGN
BAACAGCTGT
 A C G T A T C G T C G A A T G C G T C A C T A G G T A C G C A T T A C G G A T C
A C G T T C G A T C G A A G T C G T C A T A C G A T G C A C G T A C T G A G C T