Information for 7-NNTGSCAR (Motif 5)

A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G
Reverse Opposite:
G A T C G A C T T A C G A T G C G A T C T G C A T C G A T G A C
p-value:1e-24
log p-value:-5.689e+01
Information Content per bp:1.441
Number of Target Sequences with motif780.0
Percentage of Target Sequences with motif46.57%
Number of Background Sequences with motif16203.9
Percentage of Background Sequences with motif34.26%
Average Position of motif in Targets100.8 +/- 54.1bp
Average Position of motif in Background99.4 +/- 64.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.32
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:1
Score:0.86
Offset:1
Orientation:forward strand
Alignment:NNTGSCAR-
-TTGCCAAG
 A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G A C G T
A C G T A G C T A C G T A C T G A T G C A G T C C G T A C T G A T A C G

HIC1(Zf)/Treg-ZBTB29-ChIP-Seq(GSE99889)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-NNTGSCAR
VGCTGGCA-
 A C G T A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G
T A G C T A C G A T G C C A G T T C A G T A C G G A T C C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:forward strand
Alignment:NNTGSCAR-
CGTGCCAAG
 A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G A C G T
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

NFIA/MA0670.1/Jaspar

Match Rank:4
Score:0.73
Offset:0
Orientation:forward strand
Alignment:NNTGSCAR--
GGTGCCAAGT
 A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G A C G T A C G T
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T

Hic1/MA0739.1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-NNTGSCAR
GGTTGGCAT
 A C G T A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G
T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

THAP1/MA0597.1/Jaspar

Match Rank:6
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-NNTGSCAR
TNNGGGCAG
 A C G T A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G
C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

NFIC/MA0161.2/Jaspar

Match Rank:7
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:NNTGSCAR---
NNTGCCAAGNN
 A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G A C G T A C G T A C G T
G C A T T A G C G C A T C T A G G T A C A G T C C G T A T G C A A C T G C G A T C T G A

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-NNTGSCAR
ARNTGACA-
 A C G T A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G
T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:9
Score:0.67
Offset:1
Orientation:forward strand
Alignment:NNTGSCAR-
-TTGACAGC
 A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G A C G T
A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

HIC2/MA0738.1/Jaspar

Match Rank:10
Score:0.67
Offset:-1
Orientation:reverse strand
Alignment:-NNTGSCAR
NGTGGGCAT
 A C G T A C T G A G C T A C G T C T A G T A C G A T G C C T G A C T A G
T C A G A T C G A G C T A C T G C A T G A C T G A G T C C T G A A G C T